Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03891 atgggttgctttggcttctgcaaaggagatgatagtgttagaactgctgacagaggacctttcacgcagagcactcctactgggaataccagttatcatggcagacacgcagcagtacctgctcctcagacaataaattttcaacctattgctgtcccttccattacagttgatgaattgaagtctttgacagataattttggctcaaaatatttcattggtgagggcgcatatgggaaagtatatcatgttacattaaaaaatggacgtgcagtggtaatcaagaagttagattccagtaatcagccagaacaagaatttctttcacaggtctccgttgtatcaaggctgaagcatgaaaatgttgttgagcttgttaactattgtgttgatggtcctttccgtgccctttcctatgaatatgctcctaaaggatcccttcatgatattctacatggacgcaaaggtgttaagggtgcacaacctggtccagttctctcatgggctcagagagttaaaattgctgttggagcagccaggggacttgaatatcttcacgaaaaggcagagattcatatcatccatcgttacattaagtccagcaacatacttcttttttatgatgatgttgcaaagattgctgattttgatttatcaaaccaagcccctgatgctgcagcacggcttcattctacccgtgttcttgggacctttggttatcatgctccagaatatgcaatgactggacaactcacttcaaaaagtgatgtttatagctttggagttatcctgctggaacttttaaccgggcgtaagccggttgatcatacactgcccagaggacagcaaagccttgtgacctgggcagcaccaaagcttagcgaggacaaggtgaagcagtgtgttgatgttagactaaagggagagtatccttcaaagtcggttgcaaagatggctgctgttgctgcattgtgtgtgcaatatgaagctgagtttcggccaaatatgagcattatagtgaaagctctacaacctctactgcatactcgctctgttcactcaaaggaatcacccaaaatgtaa 1083 0.0 MGCFGFCKGDDSVRTADRGPFTQSTPTGNTSYHGRHAAVPAPQTINFQPIAVPSITVDELKSLTDNFGSKYFIGEGAYGKVYHVTLKNGRAVVIKKLDSSNQPEQEFLSQVSVVSRLKHENVVELVNYCVDGPFRALSYEYAPKGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAARGLEYLHEKAEIHIIHRYIKSSNILLFYDDVAKIADFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQLTSKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWAAPKLSEDKVKQCVDVRLKGEYPSKSVAKMAAVAALCVQYEAEFRPNMSIIVKALQPLLHTRSVHSKESPKM 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03891 360 CDD STKc_IRAK 73 346 - -
Pste6g03891 360 Gene3D Phosphorylase Kinase; domain 1 32 141 - -
Pste6g03891 360 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Pste6g03891 360 SUPERFAMILY Protein kinase-like (PK-like) 45 343 IPR011009 -
Pste6g03891 360 Gene3D Transferase(Phosphotransferase) domain 1 143 359 - -
Pste6g03891 360 PIRSF ILK 32 357 - -
Pste6g03891 360 Pfam Protein tyrosine and serine/threonine kinase 73 343 IPR001245 GO:0004672|GO:0006468
Pste6g03891 360 ProSiteProfiles Protein kinase domain profile. 67 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03891 360 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 33 349 - -
Pste6g03891 360 FunFam pto-interacting protein 1 143 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03891 Pste-Chr6 28099244 28103295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03891 38 344 Receptor kinase-like Gene Family AT4G02010 47.910 6.02e-86 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Pste6g03891 PK_Tyr_Ser-Thr 4.5e-45 CL0016