Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03852 atgccccaacctccatatgatttgaagaacctattggttcaaaggtgtgctgaggatgagggtgttgtgatgacaacctatgaggggaatcataatcatccagttccagcagcagccaggtccatggcatgcagcactgaggattaccctctgaaaaaccttgccttggtgcatgttgttagtgctgccacaaccaaggatccttctcttaaaggcagcattagaagcagccgtttcctcaatcattggagactctcactagaatctactcttcttagtctgaatctgaataatttaaagccttcccaaaatcaagagcagcagccccttaaccaagtgggtttgctgcatattgagctagaggaggtgaagaaggagaatcaaaatttaagatctatgctaaatgatataactgaacactatgctgctcttcagaatcagttattgttggtgatccagcagaagaaactgtcttcatcacctcgaaataatgaggacaggcaggcaaatttgacttga 519 0.0 MPQPPYDLKNLLVQRCAEDEGVVMTTYEGNHNHPVPAAARSMACSTEDYPLKNLALVHVVSAATTKDPSLKGSIRSSRFLNHWRLSLESTLLSLNLNNLKPSQNQEQQPLNQVGLLHIELEEVKKENQNLRSMLNDITEHYAALQNQLLLVIQQKKLSSSPRNNEDRQANLT 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03852 172 ProSiteProfiles WRKY domain profile. 13 36 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste6g03852 172 Gene3D WRKY domain 9 37 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste6g03852 172 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 13 47 IPR044810 GO:0003700
Pste6g03852 172 Coils Coil 120 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03852 Pste-Chr6 27733619 27747359 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03852 13 46 WRKY Transcription Factor Family AT4G04450 67.647 2.05e-10 56.6