Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03839 atgtgccaaagaagcacgagtggtggaggcatgaagctgctggggatatttgtgtttgtggcgttggtgattgtgaagtgggtggagggctttcaggatgttaatgtgacatacatagacatgcaatatgtcagtgaaagaggtttctacaatagacctttgctggttcctctgactcttattaatagtgctgccgctaaaggagctgtatgcctggatggatctttaccagggtatcattttcaccgtggatatggttcaggagcaaacaattggctcgtacaattggagtgtttatttgggttgatggtgaatgtggttggattaatactgaagtcatcttttctccagagagctgggttgtacttcagagggcaacgcatttggaaagctgctatggaagatttaatgtccaaagggatgcgctatgccaaacaggctcttctttctggatgttctgcaggaggtttagcttctattatacattgtgatgaatttcgggaattgtttcctagaaccgcaagagtaaaatgcttaagtgatgctggtttattccttgattctgttgatgtatctggccgtcgcagcttaaggaatttgtttggaagtgtggtcaccttacagggagtgcaaaagagtctaccaaggagttgtaccagtcgcctcaatccaattttgtgctattttcctcagcacttaattgccagtgttagcacaccactgtttcttctcaatgcagcttatgatacatggcagattcaagccagtcttgctccaccatctgctgactaccattggaactggtatgaatgcagaaaaaattatgcacgttgcagtgcaccacagatacagtatcttcaaggtaattga 870 0.0 MCQRSTSGGGMKLLGIFVFVALVIVKWVEGFQDVNVTYIDMQYVSERGFYNRPLLVPLTLINSAAAKGAVCLDGSLPGYHFHRGYGSGANNWLVQLECLFGLMVNVVGLILKSSFLQRAGLYFRGQRIWKAAMEDLMSKGMRYAKQALLSGCSAGGLASIIHCDEFRELFPRTARVKCLSDAGLFLDSVDVSGRRSLRNLFGSVVTLQGVQKSLPRSCTSRLNPILCYFPQHLIASVSTPLFLLNAAYDTWQIQASLAPPSADYHWNWYECRKNYARCSAPQIQYLQGN 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03839 289 PANTHER NOTUM-RELATED 40 97 IPR004963 GO:0016787
Pste6g03839 289 Pfam Pectinacetylesterase 118 288 IPR004963 GO:0016787
Pste6g03839 289 Pfam Pectinacetylesterase 54 97 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03839 Pste-Chr6 27593057 27597107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03839 25 288 Carbohydrate Esterase AT1G57590 52.885 6.69e-101 300
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03839 6 27593057 27597107 Pste6g03839 6 27593057 27597107 ECH
Pste6g03839 6 27593057 27597107 Pste5g02931 5 22072610 22076404 ECH
Pste6g03839 6 27593057 27597107 Pste4g01404 4 10473727 10478842 ECH