Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03831 atggaagggcaagtggctaaacgcagacgtgtatactctgtggaaccaaatcaaatactactgcactctatatttactaggaattatttgaaccatttagtgccggcgttagtgaagataaaggaaaagagttgtatagaagatagcagccactgtgatattaacaatgctgtcaagtttgaggtggacatggcaatggtgatgtcagcccaaggttttgcatggagtaacggccttaaagtcaagcttcaaagcgatcacgttcatgccaatgcagctaaaagaaataggtttcttgaaaatgaggctggtgaaagttcatcaaagatttgtctaaaaaatgaagttgtcccaatggaattctcttcaaaccctagctcaaagtcccaggtggaggattttgggagcaagtccaagtgcaaggacgtgtcagaaatgaaaacagatttaggcagagaagatgataatgaagatgaggaaatcaacaaccagtggaagaggctgagaaggttgatgcctggaggagaagagatgtctgatgatgaacaaatggtttcagagcttgagagttacataagctgtttgcaaatgcaggtgaacgctcttcagtttctgctgccacacacacgttaa 633 0.0 MEGQVAKRRRVYSVEPNQILLHSIFTRNYLNHLVPALVKIKEKSCIEDSSHCDINNAVKFEVDMAMVMSAQGFAWSNGLKVKLQSDHVHANAAKRNRFLENEAGESSSKICLKNEVVPMEFSSNPSSKSQVEDFGSKSKCKDVSEMKTDLGREDDNEDEEINNQWKRLRRLMPGGEEMSDDEQMVSELESYISCLQMQVNALQFLLPHTR 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03831 210 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 24 205 IPR044660 GO:0006355
Pste6g03831 210 CDD bHLH_AtIBH1_like 150 206 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03831 Pste-Chr6 27525558 27526422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03831 1 83 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 47.619 4.38e-13 62.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03831 6 27525558 27526422 Pste2g03351 2 33575607 33576221 PCT