Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03813 atgtcagtaacctacaaaggctgttacaccgtgaagcctatggaggcaacaaagtgtggacgcgaacctttatccgaatgggatcaaataggcaccataactcacgtccccacaatctacttctaccgtccttcacaaaactggctctcacattccaccattgcttccaccttgaaagaatcactaagcagagtcctagtgccgttttatccactagcaggtcgtttgcattggataaccaatggtcgtttggagcttgattgcaatgctaggggggttcacttcattgaagccgagtcctcatccaccttagaagatcttggtgacttttcaccaacttctgaatacaactaccttgtgcccactgtaaactacacccttccaattcacgagttacccttggttctgcttcagttaactcagttcaagtgtggcggcgttagcatcagcataacaatttcccatgctgtcgccgatggaccaagtgcgttgcacttcatgtgcgagtgggcgaggcttgcacgcggtgagcctttggaaacggtgccgtttcatgaccgaaaagttttgcgtgctggggagcctcctttggtgccgctaaccaagtgtcaggttcactcggagttcgatcatcctccgctactgctcggccaaagcagtaacacagaggaaaggaagaagaaaaccacactggctgttctgaaactgagcaaaacacaagttgagacacttaaaaagacagcgaatgagagttgggataggcctaggagcggtcatggttacactcgttatgagagtgtgacaggtcacgtgtggagaagtgcatgcaaggcaagggggcacagagaggaccaaccaaccgggtttggtatttgcgttgactcgaggcgtcgcatggagcctcctttgccaaaagggtattttgggaatgcgactttggatgtggttgcttctagcctcgcgggtgatttggtgtcaaagcctttggggtatgcgtctagcaggataagagaggcgattgagagagtcactgatgagtatgtgaggtcggggattgagtacatgaagcatcaagaggatttgagtaggtttcaggatctttatgcaatagggactgacaaggggcctttccatggaaaccctaatcttggtgttgttagttggttgaccttacccatttatggcgttgatttcgggtggggtaaggaggtttatatgtgtcccgggtcgcatgactttgtctttgatggagattctttgcttattcctgatccaaatggggatggatctttgctgcttgctttgtgtctgcaagtgacccatatggatgccttcaagaagcatttttatcaagacattgccgaagattga 1371 0.0 MSVTYKGCYTVKPMEATKCGREPLSEWDQIGTITHVPTIYFYRPSQNWLSHSTIASTLKESLSRVLVPFYPLAGRLHWITNGRLELDCNARGVHFIEAESSSTLEDLGDFSPTSEYNYLVPTVNYTLPIHELPLVLLQLTQFKCGGVSISITISHAVADGPSALHFMCEWARLARGEPLETVPFHDRKVLRAGEPPLVPLTKCQVHSEFDHPPLLLGQSSNTEERKKKTTLAVLKLSKTQVETLKKTANESWDRPRSGHGYTRYESVTGHVWRSACKARGHREDQPTGFGICVDSRRRMEPPLPKGYFGNATLDVVASSLAGDLVSKPLGYASSRIREAIERVTDEYVRSGIEYMKHQEDLSRFQDLYAIGTDKGPFHGNPNLGVVSWLTLPIYGVDFGWGKEVYMCPGSHDFVFDGDSLLIPDPNGDGSLLLALCLQVTHMDAFKKHFYQDIAED 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03813 456 Pfam Transferase family 1 451 - -
Pste6g03813 456 FunFam Tryptamine hydroxycinnamoyl transferase 217 450 - -
Pste6g03813 456 Gene3D - 1 210 IPR023213 -
Pste6g03813 456 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 449 - -
Pste6g03813 456 Gene3D - 218 452 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03813 Pste-Chr6 27335955 27337538 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03813 1 451 Monolignol Biosynthesis Gene Families AT5G48930 38.803 2.12e-110 331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03813 6 27335955 27337538 Pste6g03813 6 27335955 27337538 ECH