Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03802 atggcccacaagaacatgcagaagagctactttgatgtcttgggtttatgctgctcttccgaagttcctcttatcgaaaacatcttgaaacctcttcaaggaatcaaagaggtttctgttattgttccatcgcgaaccgtcattgttgtccatgacactcttgtcatttcgcaacttcaaattgtgaaggcactgaatcaagcaaggttggaagcaaatatcagagtgtatggggacgaaaagcaccaaaagagatggccaagtccttattcagttgtttctggttttctacttttgctttcgcttctcaagtttgtgtatcatcccttaaaatatttggcactaggagctgttgctgtgggtgcatacccaatcttcttaaaagctattgtctctgttcggaatcttaggctcgacataaacattctcatgctcatagcagtgattgggacaattgttatgggtgattatttggaagccgggaccatagttttcctcttctcaattgccgaatggctagagtcaagggcaagtcacaaggcaaatgcggtaatgtcatctttgatgaacatagcccctcaaaaagcagtgatagctgaaacaggagaggttgtggatgctgatgaggtgaaaataaacactattttagcagttaaagcgggtgaggtgatacctattgatggagttgttgtagatggaacttgtgaagttgatgagaaaacattgactggggaatcattccccgtggcaaaacaaaaggattctactgtatgggctggcaccatcaatttaaatggttatattagtgtgaaaactaccgcgctggctgaagattgtttggtggctaaaatggcaaagcttgttgaagaagctcaaaacagcaaaacaagcattcagagattgattgacaagtttgccaagttttataccccagccgtagtaatcatatcaacccttgtagcgttggttccagttgtgttaaaaataggtaacgagaaacactggcttcactttgcactggtcgttttagtgagtgcgtgtccttgcgcgctcatcttatcaacgccagttgcaacattttgtgcttacaccaaagcagccacatcaggtcttctcatcaaagggggtgatcatcttgaaacacttgcaaaaattaaggtcgtggcttttgacaaaacgggaaccataaccaagggtgaatttgtggtcacacattttcaatctctttcagatgacatagatttgaacacattgctttactgggtgtccagtgtagagagcaaatcaagtcatccattggcatcagcagttgttgattatggaaggtctctgttcgttgaaccagagccagaaaaggtgacagaatttgaaaattttcctggagaaggaatatgtgggaaaattgaagacagagttgtgtatattggaaataaaaaaattgccgcaagagctgggtctgaaacagttccaattttacaaggtgaagttgaaagaggaaagactactggttacatatattcgggatcaacccccgtaggatttttctctctttcagacgcttgcagattaggggttcaggaggcaatagggcagttgaagtcattgggaatcaaaaccgctatgctcactggagatagtcaatctgctgcaatgcaaactcatgagcagctggggcattctctggagttagtccatgcagaacttttgccagaggacaaggtgaaaatcatctcagaatttaagaaggaaggtccaacagccatgattggagatggtttaaatgacgcaccagcgttagctgcagctgatattggaatctcaatgggcatttcaggttctgcactggctagtgatacaggcaatataattcttatgtcaaatgatattaggaagataccagaagccattaagcttgcaagaaaagctcgtaggaaagtggtagaaaacattattttgtcaatcatgactaaggctgcgattcttggtttggccattggtggttatccacttgtttgggcagcagttgtggctgatgttggaacatgtctattggtcatctttaacagcatgttgcttttgcggagaggacacaagcatggggggaaatgttgtaggtctttcactaaaccacataccagaaaaaatggatgtggtggcactcatgataactcctctcatcatcatcatcatgaacacgagcatgatcatcatcatcatcatgaacatgagcatgatcatcatcatcatgagcatgaccatgatcaacaccaacatcatagccataagcgttgtttctcagacaagacaaaaaggatgtctcaacctcagaaatgtggtggcagtcatggtagttcctctcataatcatcatcaacatcaacatgagcatcattgccataatgaacatgatcaacatcaacatcatagccataatcaacttgatcaacatcaacatcctcagaagtgttcgtcccagacaagttccttaacacatccaccctgctcttcaaactcaatttcaggtgggaatgttaatcattgtaacaccatgaaggatcatgatcactgtaaaggaagtcatgaattccatgaacatgatcactgtcatcatggaatatgtgacaagaatcaagatggagtcaagaagcatgatactgaaaataatttgattctaaatgcagaagataatcatgcagttgcaacaaacaggcaaggtaattgtttgggacaaatggccaatgggaaagaacactaccacaaccaaaattttgagatggttactcatgacagagaatcacatagttctccttgccatctcaatctctcttgtcaaaaagaaggccaacaatttactcgtaaccattgccacctgatccatggttttgaaagtctgaaagactatgaatccaaagatgctttaagaactgatcatgacattcagcatgagaaatcagggtgtcattctgattttgagaagcatgggaaaggtgaaatgtccgttgacatcatcagtgagcatgttgaattagcctcaatgcatggttgttcgagtttggaagagaaaggaaaaggttcttgttgtgaaggctgctcagacacatgcgagaatttgcctgctgtgtgtggttgtgagagttcaaatgagagacaagatagtgcatgttgcagaaatgaggagtgttcaaaagaatgcaaggaatgtcctatcatacatgtttgtcttagtttagcaaagagagaagctggtggatgttgcaagagctacatgaaggaatgctgtgccaaactgggacactcaagagctggttttgtgggtttgtcagaaattattaccgaacagtttgaggagatagttaaagtgaacacaacatggtgtttgcgacctccattttacctgacgggtctgcacgagcttgataaagggaattgggttcataaaggataa 3444 0.0 MAHKNMQKSYFDVLGLCCSSEVPLIENILKPLQGIKEVSVIVPSRTVIVVHDTLVISQLQIVKALNQARLEANIRVYGDEKHQKRWPSPYSVVSGFLLLLSLLKFVYHPLKYLALGAVAVGAYPIFLKAIVSVRNLRLDINILMLIAVIGTIVMGDYLEAGTIVFLFSIAEWLESRASHKANAVMSSLMNIAPQKAVIAETGEVVDADEVKINTILAVKAGEVIPIDGVVVDGTCEVDEKTLTGESFPVAKQKDSTVWAGTINLNGYISVKTTALAEDCLVAKMAKLVEEAQNSKTSIQRLIDKFAKFYTPAVVIISTLVALVPVVLKIGNEKHWLHFALVVLVSACPCALILSTPVATFCAYTKAATSGLLIKGGDHLETLAKIKVVAFDKTGTITKGEFVVTHFQSLSDDIDLNTLLYWVSSVESKSSHPLASAVVDYGRSLFVEPEPEKVTEFENFPGEGICGKIEDRVVYIGNKKIAARAGSETVPILQGEVERGKTTGYIYSGSTPVGFFSLSDACRLGVQEAIGQLKSLGIKTAMLTGDSQSAAMQTHEQLGHSLELVHAELLPEDKVKIISEFKKEGPTAMIGDGLNDAPALAAADIGISMGISGSALASDTGNIILMSNDIRKIPEAIKLARKARRKVVENIILSIMTKAAILGLAIGGYPLVWAAVVADVGTCLLVIFNSMLLLRRGHKHGGKCCRSFTKPHTRKNGCGGTHDNSSHHHHHEHEHDHHHHHEHEHDHHHHEHDHDQHQHHSHKRCFSDKTKRMSQPQKCGGSHGSSSHNHHQHQHEHHCHNEHDQHQHHSHNQLDQHQHPQKCSSQTSSLTHPPCSSNSISGGNVNHCNTMKDHDHCKGSHEFHEHDHCHHGICDKNQDGVKKHDTENNLILNAEDNHAVATNRQGNCLGQMANGKEHYHNQNFEMVTHDRESHSSPCHLNLSCQKEGQQFTRNHCHLIHGFESLKDYESKDALRTDHDIQHEKSGCHSDFEKHGKGEMSVDIISEHVELASMHGCSSLEEKGKGSCCEGCSDTCENLPAVCGCESSNERQDSACCRNEECSKECKECPIIHVCLSLAKREAGGCCKSYMKECCAKLGHSRAGFVGLSEIITEQFEEIVKVNTTWCLRPPFYLTGLHELDKGNWVHKG 1147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03802 1147 NCBIfam cadmium family heavy metal-translocating P-type ATPase 140 481 - -
Pste6g03802 1147 Gene3D - 178 292 - -
Pste6g03802 1147 PRINTS Copper-transporting ATPase signature 180 198 - -
Pste6g03802 1147 PRINTS Copper-transporting ATPase signature 624 638 - -
Pste6g03802 1147 PRINTS Copper-transporting ATPase signature 567 584 - -
Pste6g03802 1147 PRINTS Copper-transporting ATPase signature 311 325 - -
Pste6g03802 1147 FunFam Putative cadmium/zinc-transporting ATPase 3 400 521 - -
Pste6g03802 1147 SUPERFAMILY HMA, heavy metal-associated domain 3 73 IPR036163 GO:0046872
Pste6g03802 1147 FunFam Putative cadmium/zinc-transporting ATPase 3 3 76 - -
Pste6g03802 1147 Pfam haloacid dehalogenase-like hydrolase 385 603 - -
Pste6g03802 1147 ProSitePatterns E1-E2 ATPases phosphorylation site. 391 397 IPR018303 -
Pste6g03802 1147 Pfam E1-E2 ATPase 199 367 - -
Pste6g03802 1147 MobiDBLite consensus disorder prediction 816 837 - -
Pste6g03802 1147 MobiDBLite consensus disorder prediction 796 815 - -
Pste6g03802 1147 Gene3D - 380 640 IPR023214 -
Pste6g03802 1147 Gene3D - 3 76 - -
Pste6g03802 1147 MobiDBLite consensus disorder prediction 771 786 - -
Pste6g03802 1147 SFLD p-type atpase 372 641 IPR044492 -
Pste6g03802 1147 SUPERFAMILY Calcium ATPase, transduction domain A 203 288 IPR008250 -
Pste6g03802 1147 MobiDBLite consensus disorder prediction 699 837 - -
Pste6g03802 1147 NCBIfam HAD-IC family P-type ATPase 163 669 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste6g03802 1147 ProSitePatterns Hypothetical cof family signature 2. 589 611 - -
Pste6g03802 1147 SFLD Haloacid Dehalogenase 372 641 - -
Pste6g03802 1147 MobiDBLite consensus disorder prediction 736 761 - -
Pste6g03802 1147 CDD P-type_ATPase_HM 113 691 - -
Pste6g03802 1147 Gene3D - 400 521 IPR023299 GO:0000166
Pste6g03802 1147 NCBIfam heavy metal translocating P-type ATPase 140 692 IPR027256 GO:0006812|GO:0016020|GO:0019829
Pste6g03802 1147 SUPERFAMILY Calcium ATPase, transmembrane domain M 140 383 IPR023298 -
Pste6g03802 1147 Coils Coil 284 304 - -
Pste6g03802 1147 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 2 695 - -
Pste6g03802 1147 SUPERFAMILY HAD-like 387 690 IPR036412 -
Pste6g03802 1147 PRINTS P-type cation-transporting ATPase superfamily signature 238 252 - -
Pste6g03802 1147 PRINTS P-type cation-transporting ATPase superfamily signature 613 625 - -
Pste6g03802 1147 PRINTS P-type cation-transporting ATPase superfamily signature 389 403 - -
Pste6g03802 1147 PRINTS P-type cation-transporting ATPase superfamily signature 535 545 - -
Pste6g03802 1147 PRINTS P-type cation-transporting ATPase superfamily signature 589 608 - -
Pste6g03802 1147 ProSiteProfiles Heavy-metal-associated domain profile. 7 73 IPR006121 GO:0046872
Pste6g03802 1147 FunFam Copper-transporting ATPase 1, putative 178 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03802 Pste-Chr6 27194153 27204558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03802 1 801 Primary Pumps ATPases AT4G30110 61.340 0.0 1038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03802 6 27194153 27204558 Pste6g03802 6 27194153 27204558 ECH