Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03728 atggaaaactttggatttggtattcaggaaggatggtatgatgggggaagcattgcttttgcagttattcttgttattcttgttacagctataagtgattataagcagtctcttcaatttcaagatctaaatgagcacaagagaaacatacatttagaggttactcgaaatggtagaagagttgagatctccatatatgatgttgttgttggtgatgttataccccttaacattggtgaccaggtccctgctgatggagttttgatcactggtcactctcttgcaattgatgaatcaagtatgactggggagagcaagattgtcgaaaaaaattctaatgatccttttctgatttctggatgtaaagttgcagatggcagtggaactatgctggtaacagctgttggtattaatactgagtgggggcttctaatggctagcatttctgaagacaatggtgaagaaactcctttgcaggtacgcttaaacggtcttgctaccttaattggtattgttgggctctctgtggctgttgttgttctgatggtgctacttgccagatatttctctggacatactagaaacccagacagaagtgttcaatttatagcaggcaagaccaaagttggtgatgccattgatggagtaattcagatattcactgttgcggtcaccattgtagtggttgcagtgcctgaagggctgcctttagcagttaccttaacacttgcctactcaatgaaaaaaatgatggcagataaagctttggtgaggaggctttctgcgtgtgagacaatggggtcagccacaaccatctgcagtgataagactggaacattgactatgaatcagatgactgtggttgaggcatgcattggtgagaagaagattactcctcctcatgataaatcacagttctctcctatgctctgctctttgctgattgaaagtgttgcacagaacactaatggaagtgtttatatccctgagggtggtaatgatgtagagatttctggatcaccgacagaaaaggcaattttgcagtggggaattcagcttgggatgaattttgaggctgccagatcagaatcatcagttattcatgtcttcccattcaattcagacaaaaagagaggaggagttgcaatacagacgtctgactctgaaatccatatacattggaaaggtgctgctgagatagtcctagcttgctgtacagggtataaagatgttaatgatcagttgttggacatgaatgaagagaagatgacagcttttaaaaaagttattgaagatatggctgctgttagtctacgttgtattgcgattgcatatagatcatataattcatatgaaataaatgttccaactagcgaagaagaacttggcaactggtcattacctgaggatgatcttgttttattggctattattggcctgaaggatccttgtcgacctggtgttaaagatgcagtgcagctttgccaaaaggcgggggttgaggtaaaaatggtcactggtgacaatgtcaaaactgcaaaagcaattgctgtggaatgtggaatacttgattcaatttctgatgctacagagccaaagatcattgaaggaaaacaattccgtgccttgacagatgatgagagagcagatattgttgaaaggatattggttatgggacgctcatctcctaatgacaagcttttacttgtgcaagcattgaggaggaaggggcatgttgtggctgtaacaggagatggaacaaatgatgctcccgccttgcatgaggctgatattggtcttgcaatgggtatccaaggcacagaagttgctaaagagagctctgacatcattattttggacgacaattttacttcagtagtgaaggttgtcaaatgggggcgatctgtatttgcaaatattcagaaatttatccaattccagcttacagtcaatatagcagcacttgctataaatgttgttgctgcattttccaccggtgacatcccactaaatacagtacagctgctctgggtaaatcttatcatggatactcttggagcattagccttggcaaccgaaccaccaactgattccctaatggatcaacgtccaatgggtcgaagtgaatgctataatgaacttgtgtacaatgaacctgctgttcaagcttcattaccagaacatcagatgctgtgcctatgtttttaa 2208 0.0 MENFGFGIQEGWYDGGSIAFAVILVILVTAISDYKQSLQFQDLNEHKRNIHLEVTRNGRRVEISIYDVVVGDVIPLNIGDQVPADGVLITGHSLAIDESSMTGESKIVEKNSNDPFLISGCKVADGSGTMLVTAVGINTEWGLLMASISEDNGEETPLQVRLNGLATLIGIVGLSVAVVVLMVLLARYFSGHTRNPDRSVQFIAGKTKVGDAIDGVIQIFTVAVTIVVVAVPEGLPLAVTLTLAYSMKKMMADKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVEACIGEKKITPPHDKSQFSPMLCSLLIESVAQNTNGSVYIPEGGNDVEISGSPTEKAILQWGIQLGMNFEAARSESSVIHVFPFNSDKKRGGVAIQTSDSEIHIHWKGAAEIVLACCTGYKDVNDQLLDMNEEKMTAFKKVIEDMAAVSLRCIAIAYRSYNSYEINVPTSEEELGNWSLPEDDLVLLAIIGLKDPCRPGVKDAVQLCQKAGVEVKMVTGDNVKTAKAIAVECGILDSISDATEPKIIEGKQFRALTDDERADIVERILVMGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFTSVVKVVKWGRSVFANIQKFIQFQLTVNIAALAINVVAAFSTGDIPLNTVQLLWVNLIMDTLGALALATEPPTDSLMDQRPMGRSECYNELVYNEPAVQASLPEHQMLCLCF 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03728 735 Pfam E1-E2 ATPase 51 251 - -
Pste6g03728 735 ProSitePatterns E1-E2 ATPases phosphorylation site. 275 281 IPR018303 -
Pste6g03728 735 PRINTS P-type cation-transporting ATPase superfamily signature 498 508 - -
Pste6g03728 735 PRINTS P-type cation-transporting ATPase superfamily signature 607 619 - -
Pste6g03728 735 PRINTS P-type cation-transporting ATPase superfamily signature 476 487 - -
Pste6g03728 735 PRINTS P-type cation-transporting ATPase superfamily signature 97 111 - -
Pste6g03728 735 PRINTS P-type cation-transporting ATPase superfamily signature 273 287 - -
Pste6g03728 735 PRINTS P-type cation-transporting ATPase superfamily signature 583 602 - -
Pste6g03728 735 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 280 480 IPR023299 GO:0000166
Pste6g03728 735 SUPERFAMILY Calcium ATPase, transmembrane domain M 11 709 IPR023298 -
Pste6g03728 735 SFLD p-type atpase 255 635 IPR044492 -
Pste6g03728 735 SUPERFAMILY HAD-like 271 688 IPR036412 -
Pste6g03728 735 Gene3D - 270 628 IPR023214 -
Pste6g03728 735 Pfam haloacid dehalogenase-like hydrolase 270 597 - -
Pste6g03728 735 FunFam Calcium-transporting ATPase 283 483 - -
Pste6g03728 735 NCBIfam calcium-translocating P-type ATPase, PMCA-type 9 709 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pste6g03728 735 PRINTS Sodium/potassium-transporting ATPase signature 655 676 - -
Pste6g03728 735 PRINTS Sodium/potassium-transporting ATPase signature 392 410 - -
Pste6g03728 735 PRINTS Sodium/potassium-transporting ATPase signature 16 36 - -
Pste6g03728 735 PRINTS Sodium/potassium-transporting ATPase signature 266 287 - -
Pste6g03728 735 Gene3D - 11 709 - -
Pste6g03728 735 FunFam Calcium-transporting ATPase 9 plasma membrane-type 127 297 - -
Pste6g03728 735 SUPERFAMILY Calcium ATPase, transduction domain A 51 146 IPR008250 -
Pste6g03728 735 Gene3D - 37 149 - -
Pste6g03728 735 Gene3D - 283 483 IPR023299 GO:0000166
Pste6g03728 735 FunFam Calcium-transporting ATPase 28 149 - -
Pste6g03728 735 FunFam Calcium-transporting ATPase 477 628 - -
Pste6g03728 735 NCBIfam HAD-IC family P-type ATPase 18 188 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste6g03728 735 NCBIfam HAD-IC family P-type ATPase 214 304 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste6g03728 735 NCBIfam HAD-IC family P-type ATPase 551 663 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste6g03728 735 PANTHER CATION TRANSPORTING ATPASE 5 709 - -
Pste6g03728 735 Pfam Cation transporting ATPase, C-terminus 668 708 IPR006068 -
Pste6g03728 735 SFLD Haloacid Dehalogenase 255 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03728 Pste-Chr6 26442510 26452317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03728 7 735 Primary Pumps ATPases AT5G57110 72.367 0.0 1066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03728 6 26442510 26452317 Pste6g03728 6 26442510 26452317 ECH
Pste6g03728 6 26442510 26452317 Pste2g01426 2 15507306 15524387 PCT