Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03707 atggaagagaatacatcaatacaagaagcagcttccgctgggttgaagagtatggagcatctcattcgcgtcctttcttcttctgcttcctcatcttcatcttcttccccacaccaccttgactgcacggaaatcacccacttcactgtctctaagttcaaacaagtcatcaacttgttgaacggcaccggccatgctcgctttcgtcgctctccttctccttctcaacctcaacctcaacctcaaccacccactctccattttgcaaacactatttctctaaagtcaaatcccacacccaaacccaaacccaaacctaaaccttgtacagatttgtcggtttctcaatactctaaaaccaccacctttagcatatcccctcccatctccaccaccacctcctcttttatgtcctccattaccgccgacggcagcgtttccaacggaaagatcggcccagccatcctcgccgcggccaaaccccctctctcctcatcccaccggaagaggtgtcacgacgccaccctctccgccggaaaaccctcatcctccgctcactgccattgctccaagagaagaaaatctcgtgtgaaacgaatgattcgagtgccggcgataagttcgaagattgctgatatcccagcggacgagtactcgtggagaaagtatggtcaaaagcccatcaagggatcaccctacccacgagggtactacaagtgcagtagtgtcagagggtgtccagccaggaagcacgtggagcgcgcccaggatgaccccaacatgcttatcgttacttacgaaggagagcaccgtcatccgcaaccgcaaccgcaaccgcaaccgcaaccgccgcagccgccctgtttaagaggtggcggagatccaaaaattatggcaccgactgtttaa 909 0.0 MEENTSIQEAASAGLKSMEHLIRVLSSSASSSSSSSPHHLDCTEITHFTVSKFKQVINLLNGTGHARFRRSPSPSQPQPQPQPPTLHFANTISLKSNPTPKPKPKPKPCTDLSVSQYSKTTTFSISPPISTTTSSFMSSITADGSVSNGKIGPAILAAAKPPLSSSHRKRCHDATLSAGKPSSSAHCHCSKRRKSRVKRMIRVPAISSKIADIPADEYSWRKYGQKPIKGSPYPRGYYKCSSVRGCPARKHVERAQDDPNMLIVTYEGEHRHPQPQPQPQPQPPQPPCLRGGGDPKIMAPTV 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03707 302 Gene3D WRKY domain 200 276 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste6g03707 302 MobiDBLite consensus disorder prediction 274 290 - -
Pste6g03707 302 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 4 279 IPR044810 GO:0003700
Pste6g03707 302 MobiDBLite consensus disorder prediction 65 113 - -
Pste6g03707 302 SMART WRKY_cls 214 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste6g03707 302 Pfam Plant zinc cluster domain 168 212 IPR018872 -
Pste6g03707 302 MobiDBLite consensus disorder prediction 250 302 - -
Pste6g03707 302 SUPERFAMILY WRKY DNA-binding domain 212 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste6g03707 302 ProSiteProfiles WRKY domain profile. 209 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste6g03707 302 Pfam WRKY DNA -binding domain 216 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste6g03707 302 FunFam WRKY transcription factor 65 198 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03707 Pste-Chr6 26292068 26293475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03707 1 283 WRKY Transcription Factor Family AT2G24570 50.476 2.06e-86 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste6g03707 WRKY 1.5e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03707 6 26292068 26293475 Pste6g03707 6 26292068 26293475 ECH
Pste1g02274 1 7731510 7733809 Pste6g03707 6 26292068 26293475 PCT
Pste6g03707 6 26292068 26293475 Pste2g01411 2 15379342 15380590 PCT