Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03703 atggggaactgttggagtgttcaatcagattctcggggcggtcaccgcaactccaattctacacccaacccttccaatcaatcagggagtaataagttttctgctactctcagcaacagaagattaatacagaatggcaattctacttctcttgggcgtagcagccactctggaggaatcagcaggttttttggaccaagtagtagcaataactactcaacaggcaacaacacaagcacatcactctggggaggctctgagaatagccaagcctctcgagtcagagataaagaggagtttcctcaagggcagatcttggatgctcccaacttgagaacatttactttagtagaactaaaggtagccacaaaaaatttcagggttagcactgtgttaggagagggagggtttggtacagtatacaagggtttgatcagaggcgagggattgactattgccatcaagaaattgaattctggaagcaggcaaggaattctggaatggcagtcagaggtgaatttcttagggaggctttctcatcctaaccttgttaaattgttgggatttgggagagaggatagtgaactgttccttgtgtatgaattcttgcatcgtggcagtttggataatcatctatttggaagaggagcaaatgttcggccactttcttgggacacaaggctaaagattatgatcggagcagccaggggactgcatttccttcattccttggaggaaaaaattatatatagagattttaaaccctcaaatgtactacttgacattgcatatactgctaagttatcagactttggtttagctaaatctattccttcgcctgatgagagtcacgtctcaacacagattgtgggaacacacggctatgctgctccagagtacgttgcaacaggtcatttgtatgtgaaaagtgacgtgtatggatttggaattgttttggtggaggtgatgactgggaagaggataggggatataatgggcaagtgtcagaaaatgtccttgagggattggctcaaaagaaatatactaaatagaggaaaaataagaagcaccatggatgcaaggttggaaggcaagtatccaaacaacttagctttagaattagctcagctagcttccaaatgcatccaaacagagcctaaagtgaggccatcaatgaaagaggtggttgaaacattggaaaaaatagaagcagccaatgagaaaccagctgataacagaagacgggttactcgttcccgtgtagttcaacaacatggcaggccggatggtggttga 1296 0.0 MGNCWSVQSDSRGGHRNSNSTPNPSNQSGSNKFSATLSNRRLIQNGNSTSLGRSSHSGGISRFFGPSSSNNYSTGNNTSTSLWGGSENSQASRVRDKEEFPQGQILDAPNLRTFTLVELKVATKNFRVSTVLGEGGFGTVYKGLIRGEGLTIAIKKLNSGSRQGILEWQSEVNFLGRLSHPNLVKLLGFGREDSELFLVYEFLHRGSLDNHLFGRGANVRPLSWDTRLKIMIGAARGLHFLHSLEEKIIYRDFKPSNVLLDIAYTAKLSDFGLAKSIPSPDESHVSTQIVGTHGYAAPEYVATGHLYVKSDVYGFGIVLVEVMTGKRIGDIMGKCQKMSLRDWLKRNILNRGKIRSTMDARLEGKYPNNLALELAQLASKCIQTEPKVRPSMKEVVETLEKIEAANEKPADNRRRVTRSRVVQQHGRPDGG 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03703 431 ProSitePatterns Protein kinases ATP-binding region signature. 132 156 IPR017441 GO:0005524
Pste6g03703 431 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 203 413 - -
Pste6g03703 431 MobiDBLite consensus disorder prediction 1 33 - -
Pste6g03703 431 Pfam Protein kinase domain 127 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03703 431 Gene3D Phosphorylase Kinase; domain 1 110 202 - -
Pste6g03703 431 SUPERFAMILY Protein kinase-like (PK-like) 110 404 IPR011009 -
Pste6g03703 431 MobiDBLite consensus disorder prediction 65 90 - -
Pste6g03703 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Pste6g03703 431 PANTHER OS01G0588500 PROTEIN-RELATED 68 403 - -
Pste6g03703 431 Gene3D Transferase(Phosphotransferase) domain 1 203 425 - -
Pste6g03703 431 FunFam receptor-like protein kinase FERONIA 88 202 - -
Pste6g03703 431 MobiDBLite consensus disorder prediction 65 96 - -
Pste6g03703 431 ProSiteProfiles Protein kinase domain profile. 126 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03703 431 CDD STKc_IRAK 132 402 - -
Pste6g03703 431 MobiDBLite consensus disorder prediction 406 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03703 Pste-Chr6 26251970 26256195 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03703 112 407 Receptor kinase-like Gene Family AT4G02010 44.482 1.89e-81 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pste6g03703 Pkinase 1.3e-48 CL0016