Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03691 atggcaatattgaccaacacggttcaaccagaatgcttgcttcagtccccaagaatgcctcgaagaatactccaagaggaacctcccagtccttcatccttggaggatttacaaatctccgtgtcacaacatgaccctggagtattcttcttccttggagggattataatgctcatcatgttgctgattcttgtgtttatattttggaggtgtattaaacggccagcaaaggtgttggagaacacagctattacaagtcagcagcatggaccgatggagttcattagtgggaacattcggacaattagctactttgacttccggacattgaggagggccactaagaattttcatcctcgaaatcttcttggaagtggtggatttgggcctgtctatcagggaaaattgacagatggaaggctcattgcagtcaagacattgtctcttgacaagtctcaacaaggagaaaaagaatttctggcagaagtaagaatgatcacaagcatccaacacaaaaacctggttcgccttctcggatgttgcacagatggacctcaaaggatacttgtgtacgagtacatgaagaacagaagtttggacctcataatatatggaaagagtgaccaatttcttaaatggagcattaggttccaaattattattggagtagcacgggggctgcaatacctccacgaggattcacatttaagaattgttcaccgagacatcaaggctagcaacattcttcttgatgagaagtttcagccgaggattggagactttgggctagccaggttcttccctgaagaccaagcttaccttagcactcagttcgcaggaacattaggttatacagctcccgagtatgccatcagaggagaactgtcggagaaggctgacatatatagttttggagttctagtgcttgaaatcatcagttgcaggaaaaacacagatcttactttaccatcagaaatgcagtaccttcctgaatatgcatggaaactttatgagaagtcaatgttgatggaaattgtagatccaaagctgcgagaacacgagatagaagaaaaggatgttatgcaagtactccatgtgggcttattatgcattcagccacatgcagatttgagacctgccatgtcagagattgtagcaatgttgacatttaaggttgaaatggttagagcaccaatgaggccaaccttcgtggatcgacggcgtgtaatggatgatgaacaacactcttgggaagccatatcggaggctttgaaaactgcagtggcatccccacgtaaagcaccgacactgtag 1314 0.0 MAILTNTVQPECLLQSPRMPRRILQEEPPSPSSLEDLQISVSQHDPGVFFFLGGIIMLIMLLILVFIFWRCIKRPAKVLENTAITSQQHGPMEFISGNIRTISYFDFRTLRRATKNFHPRNLLGSGGFGPVYQGKLTDGRLIAVKTLSLDKSQQGEKEFLAEVRMITSIQHKNLVRLLGCCTDGPQRILVYEYMKNRSLDLIIYGKSDQFLKWSIRFQIIIGVARGLQYLHEDSHLRIVHRDIKASNILLDEKFQPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYEKSMLMEIVDPKLREHEIEEKDVMQVLHVGLLCIQPHADLRPAMSEIVAMLTFKVEMVRAPMRPTFVDRRRVMDDEQHSWEAISEALKTAVASPRKAPTL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03691 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Pste6g03691 437 SUPERFAMILY Protein kinase-like (PK-like) 95 391 IPR011009 -
Pste6g03691 437 SMART serkin_6 117 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03691 437 CDD STKc_IRAK 123 389 - -
Pste6g03691 437 FunFam Cysteine-rich receptor-like protein kinase 10 81 193 - -
Pste6g03691 437 Pfam Protein tyrosine and serine/threonine kinase 121 388 IPR001245 GO:0004672|GO:0006468
Pste6g03691 437 Gene3D Phosphorylase Kinase; domain 1 90 193 - -
Pste6g03691 437 Gene3D Transferase(Phosphotransferase) domain 1 194 399 - -
Pste6g03691 437 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 194 398 - -
Pste6g03691 437 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 57 414 - -
Pste6g03691 437 ProSiteProfiles Protein kinase domain profile. 117 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03691 Pste-Chr6 26130700 26133926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03691 105 404 Receptor kinase-like Gene Family AT1G56120 49.000 1.15e-100 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste6g03691 PK_Tyr_Ser-Thr 1.4e-47 CL0016