Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03673 atggggctggatttgcctttgatgctgcagctactgaagctttgcatcattggctttgctgtgacagctcaaggatcgaaaggatttgttatatccctgtctccagctaacttacatgtatatcattcccctagctctccagcaatgccaaatgggccattctttcagcctctgaagacactaccacttcccacagcagctccatcccctcacaagattaaagacattgaatcatccaattctccaccatatgggtttgttccgtcacaatcagtagttcaagggaacaagccaccatctgtaaaaaccagtgctcctcaaacaaaagcgcctggtgttagtcctcctgtctctacaccaactgctccagctccagttgcaatatattctggcagatcaccaaaatcttctccagtcagccaaccaattgaacatggaaatttgacacctaatgttgataggaggagtgcaaataagagtcaccttgcacagccattttcactagttgctttgccaaatgaatcacctgtcagccagtctcctgaacatgcaagttttccctctagtgtcagtgtaaatatgggtcacaacttgaagcctgttccagccagtaccgatcttaaatcatatttactattgtattatttcatatttgcacctaatgttcataaaagcaatacaaacaaaggtctcccttcggacccagtttcactgggcagtacagactctgttgcatccccaccatggaaagtcgaaaataaccccccagaaagccaccctattgtcccaacaataactccatccatattacctgcaccagttacatcacctccaaatgcatttccattaaaaccaccattggtccatccaattgttccagtagcatttccatcaaaattaccagcacctttggcatctcccactcccttgagaatcatcaactggaaggaaggtggagcaccagttgttgcacctttgttaagaaatccaaaaccacttccagctgtaatacctgctcaaggttcttcattttctccattcccttcccctattcgttcaaacatgggccaaatttcaccagttccttctccaccaattaagcatgcatctcacacaactggaatacctgcatctgagtcttcttccaagagacctaagatgcctctcctgcctcaagttcaagcacttccacccccaccaactaatgaagattatcaatcaattgtctgcacagaaccttatacaaattctcggcctggagaaccttgcatatgcgtctggcccatgcgagttggtcttcgccttagtgtttctctttacaccttcttccctttggtttcagaactagcttctgaaattgccacaggggtttttatgaaacaaagtcaagttcgcattattggagcaaatgaagcaaaccaacaacctgagaaaactgttgtccttatagatttggtgccacttggggaacggtttgataatactacagccttttttacttctgacagattttggcataaaaaggttcttttaaaagctttctactttggagactatgatgtgttatatgtgagttatccaggtttacctccttctcctccttcaaaccttaacatgttcaatggtggtccatattccaatgatggcaataatggagggacaataaagcccttgggggttgacatacagaagagacagcataaaggtggacttaccagaggcataatttccattattgctgtttcagtttgtttagcagttgttttatgtgctgctgctgcttgggttatgttcaagttcagagatcatgttagtcagccagcatcaactccacggaagctttcaccatcttctcttaccaaagaatcaggtactgctggatcatgtagaggagggagagttggttccatttccacatcatttcgatctagcattgctgcttatacaggatctgctaagactttcagtacgaatgacattgagaaagctacttgtaatttccttgcttcaagaattctaggagaaggtggttttgggcttgtatacagtggtatccttgaagatgggacaaaagtggcagtcaaggttctaaagagggaggatcagcatggtgatcgtgaatttttagctgaagttgagatgcttggtcgtcttcaccatagaaatttggtcaagttaattggtatatgtatcgaagacagcttccgttgcttggtttatgaactcattccaaatggaagcgtggaatcccatttacatggggttgacaaggaaaacggcacccttgattggggtgcccggatgaaaatagctcttggtgcagctcgtggtctagcttatctgcatgaagattctagtccccgagttatacatagggacttcaagtctagcaacatattgttggaagatgattttacacctaaagtatctgattttggattggctagaactgctacagatgagaacaacaaacacatatcaacacgtgtcatgggaacttttggttatgtggcaccggagtatgcaatgactggtcatcttcttgttaagagtgatgtttacagctatggtgttgttcttcttgagcttttgaccggaagaaaacctgtagacatgtcacaagctcctggtcaagagaatcttgttggttgggctcgtccacttctcacaagtaaagaaggatgtgaagcaatgatagacccatctctagaagctgatgtgccttttgatagcgtggctaaagttgccgctattgcttcaatgtgtgtgcaaccagaggtatcaaaccgtcccttcatgggcgaggttgtgcaggctttgaaacttgtatgtaatgaatgtgacgcagcaaaagaagaagcaggctcaagaagttctagcctggaggatttgtctgttgatttagatcttggaatcagcactctttctggccatctatcagataatttccaaagccaattctcggccactaactttgaatctggagttgatattgaaagagggttggctgcatcagaactgttcagttcttcagcaagatttggctgggtgggttctggatcatatagaaggaactcttactcaggtcctctgcgaaccagaagaagcagggggctctggcagataattagaagtctttctagtggcagtatcagtgaacatggaactatgttgaagttatga 3183 0.0 MGLDLPLMLQLLKLCIIGFAVTAQGSKGFVISLSPANLHVYHSPSSPAMPNGPFFQPLKTLPLPTAAPSPHKIKDIESSNSPPYGFVPSQSVVQGNKPPSVKTSAPQTKAPGVSPPVSTPTAPAPVAIYSGRSPKSSPVSQPIEHGNLTPNVDRRSANKSHLAQPFSLVALPNESPVSQSPEHASFPSSVSVNMGHNLKPVPASTDLKSYLLLYYFIFAPNVHKSNTNKGLPSDPVSLGSTDSVASPPWKVENNPPESHPIVPTITPSILPAPVTSPPNAFPLKPPLVHPIVPVAFPSKLPAPLASPTPLRIINWKEGGAPVVAPLLRNPKPLPAVIPAQGSSFSPFPSPIRSNMGQISPVPSPPIKHASHTTGIPASESSSKRPKMPLLPQVQALPPPPTNEDYQSIVCTEPYTNSRPGEPCICVWPMRVGLRLSVSLYTFFPLVSELASEIATGVFMKQSQVRIIGANEANQQPEKTVVLIDLVPLGERFDNTTAFFTSDRFWHKKVLLKAFYFGDYDVLYVSYPGLPPSPPSNLNMFNGGPYSNDGNNGGTIKPLGVDIQKRQHKGGLTRGIISIIAVSVCLAVVLCAAAAWVMFKFRDHVSQPASTPRKLSPSSLTKESGTAGSCRGGRVGSISTSFRSSIAAYTGSAKTFSTNDIEKATCNFLASRILGEGGFGLVYSGILEDGTKVAVKVLKREDQHGDREFLAEVEMLGRLHHRNLVKLIGICIEDSFRCLVYELIPNGSVESHLHGVDKENGTLDWGARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEDDFTPKVSDFGLARTATDENNKHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQAPGQENLVGWARPLLTSKEGCEAMIDPSLEADVPFDSVAKVAAIASMCVQPEVSNRPFMGEVVQALKLVCNECDAAKEEAGSRSSSLEDLSVDLDLGISTLSGHLSDNFQSQFSATNFESGVDIERGLAASELFSSSARFGWVGSGSYRRNSYSGPLRTRRSRGLWQIIRSLSSGSISEHGTMLKL 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03673 1060 SUPERFAMILY Protein kinase-like (PK-like) 647 940 IPR011009 -
Pste6g03673 1060 Pfam Protein tyrosine and serine/threonine kinase 670 940 IPR001245 GO:0004672|GO:0006468
Pste6g03673 1060 ProSitePatterns Protein kinases ATP-binding region signature. 673 695 IPR017441 GO:0005524
Pste6g03673 1060 MobiDBLite consensus disorder prediction 66 158 - -
Pste6g03673 1060 Gene3D Phosphorylase Kinase; domain 1 639 742 - -
Pste6g03673 1060 Gene3D Transferase(Phosphotransferase) domain 1 743 964 - -
Pste6g03673 1060 PANTHER OS01G0750732 PROTEIN 397 968 - -
Pste6g03673 1060 CDD STKc_IRAK 673 941 - -
Pste6g03673 1060 MobiDBLite consensus disorder prediction 133 158 - -
Pste6g03673 1060 FunFam receptor-like serine/threonine-protein kinase ALE2 640 742 - -
Pste6g03673 1060 ProSiteProfiles Protein kinase domain profile. 667 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03673 1060 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Pste6g03673 1060 MobiDBLite consensus disorder prediction 608 625 - -
Pste6g03673 1060 MobiDBLite consensus disorder prediction 606 632 - -
Pste6g03673 1060 FunFam Receptor-like serine/threonine-protein kinase ALE2 743 959 - -
Pste6g03673 1060 MobiDBLite consensus disorder prediction 358 385 - -
Pste6g03673 1060 MobiDBLite consensus disorder prediction 82 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03673 Pste-Chr6 25915351 25925015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03673 402 1056 Receptor kinase-like Gene Family AT5G56890 63.939 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pste6g03673 PK_Tyr_Ser-Thr 9.3e-48 CL0016