Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03672 atggcttcacactcatttgaactgtcagatgccaccagaggatttgaccatcagagactagttggatcaggtggtcatggacatgtctacaaaggtgctctaatggatgggtcaccaatagcagtcaaggctcttgttctaccttatatggacaatgggagcttggagagccgccggtacccttcttgcggatcattagacttgagtattgtccagaaggtgaatatttgcagtgatgtaaccgaatggatggcctatttgcatcatcattctccagtcagagtcacacactgtgatctaaaaccaagcaatattcttctcaatgacgacatgacagctctcatttctgattataggactgcaaagctaattacgaatgttggcgatgaggctattgataacatgggcaactctagtgcaaatttgttatttggatccattggacacattgcaccagaaaaggtggtaaatcctgctttcgtgacagcatcaagaggtcaatcccgagagattagaaagaagtgggaagttgctgttgcagagttaattgagttggggcttctttgcacacaggaattgccttcaacaagaccaacaatgcttaatgcagcagatgacttaaatcgtctcaagagataccttaatgggtacacaacagcaaattttgcctcgtcttttggaatttcatgttccacgtggtga 702 0.0 MASHSFELSDATRGFDHQRLVGSGGHGHVYKGALMDGSPIAVKALVLPYMDNGSLESRRYPSCGSLDLSIVQKVNICSDVTEWMAYLHHHSPVRVTHCDLKPSNILLNDDMTALISDYRTAKLITNVGDEAIDNMGNSSANLLFGSIGHIAPEKVVNPAFVTASRGQSREIRKKWEVAVAELIELGLLCTQELPSTRPTMLNAADDLNRLKRYLNGYTTANFASSFGISCSTW 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03672 233 ProSitePatterns Serine/Threonine protein kinases active-site signature. 95 107 IPR008271 GO:0004672|GO:0006468
Pste6g03672 233 SMART serkin_6 15 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03672 233 ProSiteProfiles Protein kinase domain profile. 1 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03672 233 Pfam Protein kinase domain 45 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03672 233 SUPERFAMILY Protein kinase-like (PK-like) 6 207 IPR011009 -
Pste6g03672 233 Gene3D Transferase(Phosphotransferase) domain 1 54 164 - -
Pste6g03672 233 Gene3D Phosphorylase Kinase; domain 1 3 53 - -
Pste6g03672 233 ProSitePatterns Protein kinases ATP-binding region signature. 21 43 IPR017441 GO:0005524
Pste6g03672 233 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 43 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03672 Pste-Chr6 25910060 25913006 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03672 7 214 Receptor kinase-like Gene Family AT5G46330 28.571 8.60e-23 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pste6g03672 Pkinase 5.8e-11 CL0016