Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03671 atggccccaagaatccttctgtgcggcgatgttttagggcgcctcaaccagctcttcaagcgcgtctcatcggtgaccctccctttcctcacttctagggttttttctcatcactcactcggagccatgccactgaatccatttcatttcatccggttgttgcaggttagcaaatctgcaggtccattcgacgcgctcttgtgtgtcggtcagttcttccctgactcaccggaccagcttgacgagttcatgacatatatcgaaggtgggtcccacattcctctcccaacatacttcatcggtgactacggcgtcgccgcccccaaagttctcttgcaagcttccaaggactccgccaaccgcggcttcaagatggacggcttcaaggtttgcgacaacttgtattggttgaaaggcagtggcaaattccctctattcgggttatccgtggtctatttatctggaaggaagtcatccagtcttcaacagtttggaacttacacccaagacgatgttgatgctttgcgagcaattgctgaggaacctcaacttgttgatttgttcttgacatatccttcaatcatgtgcattactcgtgtagacatacttggggttaccaatagagcagccgctgtcgacatacctgccggactgtctgatgctgtaggcagtgattcaaccataacggagttagtacaagagatcaaaccacgttatcacattgcaggtactaaaggtatatactatgcacgtgaaccatattccaatgttgatgctgttcatgtcactcgtttcatagggcttgcttctgttggaaatagagataagcagaaatttatccatgcaatctcccctactcctgcatccaccatgtcttcatctgagattgccatgaaaacaacaaataccaccttatcgccatacacatttatggagaaaagaacttctccaatggattccacgaagagatccagtgattctacttctgattctcaatattggagatacgatgtttctcaaaagcgacaaaaatgcgatgctacacatggtgataagctgtgtttcaaatttgtttcttctggctcttgtccacgaggagagaagtgcaattttcgacatgatatagatgcaagggaacagtgtatgagaggtgtttgttttgattttttgaataagggaaaatgtgaaaagggtccagattgcaactttaaacacagcttgcaggataaaggagacagacatccttctaggaggcctggatccggcaggtcaaaagaatgttggttttgcttgtcaagcccaagtgtggagtcacatttaattataagcattggggaaaattactacttggcattggctaaaggtcctcttgttgaagaccatgtactgataataccagtcgagcatatgcccagtaccttatctatgtcttctgaatctgaaattcagctctctgagtttcagaacagtcttaagagttactgcaagagccaagagaaggaagtcatcttttttgagtgggcctctatacgtggcactcatgctaatcttcaggccattcccattccatcttccaaagcagttatggttgaaaaagttttcaatttagcggcacagaagttgggatttgaatttgtggctaagaaatgtaagtgttacttcagagcatgcttcatatcgttgcttatgtggtctgcttcagacctggatccattaagatcatcccatgcaggtttgttctccagcaagatcgatgggattgtcgctcaggattgtagacttggtagcatttctgatggaaggaagtttttgaagacacaaattgatggggattcaagcttgttctacgttcaagttccaggaggcacagtgctgctgcatcatgttaaagagaaagagaaatttcctgcccaatttggtcgtgagatagagttaacacttgtaaacctgtatcaggttctggctgggttacttaatatggctgataatgctgattggaggaatcgtcaacatagcaaaggtgaagaaatcaaaattgttgaagatttcaagagccgatttcaagaatatgatccaaactga 2082 0.0 MAPRILLCGDVLGRLNQLFKRVSSVTLPFLTSRVFSHHSLGAMPLNPFHFIRLLQVSKSAGPFDALLCVGQFFPDSPDQLDEFMTYIEGGSHIPLPTYFIGDYGVAAPKVLLQASKDSANRGFKMDGFKVCDNLYWLKGSGKFPLFGLSVVYLSGRKSSSLQQFGTYTQDDVDALRAIAEEPQLVDLFLTYPSIMCITRVDILGVTNRAAAVDIPAGLSDAVGSDSTITELVQEIKPRYHIAGTKGIYYAREPYSNVDAVHVTRFIGLASVGNRDKQKFIHAISPTPASTMSSSEIAMKTTNTTLSPYTFMEKRTSPMDSTKRSSDSTSDSQYWRYDVSQKRQKCDATHGDKLCFKFVSSGSCPRGEKCNFRHDIDAREQCMRGVCFDFLNKGKCEKGPDCNFKHSLQDKGDRHPSRRPGSGRSKECWFCLSSPSVESHLIISIGENYYLALAKGPLVEDHVLIIPVEHMPSTLSMSSESEIQLSEFQNSLKSYCKSQEKEVIFFEWASIRGTHANLQAIPIPSSKAVMVEKVFNLAAQKLGFEFVAKKCKCYFRACFISLLMWSASDLDPLRSSHAGLFSSKIDGIVAQDCRLGSISDGRKFLKTQIDGDSSLFYVQVPGGTVLLHHVKEKEKFPAQFGREIELTLVNLYQVLAGLLNMADNADWRNRQHSKGEEIKIVEDFKSRFQEYDPN 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03671 693 Gene3D - 343 421 - -
Pste6g03671 693 Gene3D - 422 541 IPR036265 -
Pste6g03671 693 Pfam Protein similar to CwfJ C-terminus 1 423 534 IPR006768 -
Pste6g03671 693 PANTHER CWF19, CELL CYCLE CONTROL PROTEIN 4 692 IPR040194 -
Pste6g03671 693 ProSiteProfiles Zinc finger C3H1-type profile. 385 408 IPR000571 GO:0046872
Pste6g03671 693 Pfam Protein similar to CwfJ C-terminus 2 603 691 IPR006767 -
Pste6g03671 693 SUPERFAMILY HIT-like 425 493 IPR036265 -
Pste6g03671 693 SUPERFAMILY CCCH zinc finger 350 377 IPR036855 GO:0046872
Pste6g03671 693 CDD MPP_CWF19_N 6 271 - -
Pste6g03671 693 ProSiteProfiles Zinc finger C3H1-type profile. 353 376 IPR000571 GO:0046872
Pste6g03671 693 SMART c3hfinal6 382 407 IPR000571 GO:0046872
Pste6g03671 693 SMART c3hfinal6 350 375 IPR000571 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pste6g03671 CwfJ_C_1 3.3e-36 CL0265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03671 6 25898171 25905880 Pste6g03671 6 25898171 25905880 ECH