Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03648 atggtagaagaagtagcagtagcagtagcagtggcaagagtgaaagcggagttgttggacgacagcgaaagcgattgccacgacgacgttttcagcgaaagcaaggactcgggagtgactgaagaagaagcaaccacgggtcacgtgaaggaggaactcgatgacggcgccgttaacggctcctcctcctcttccatggcccagttgcccaaacctatggaagggttgcacgaggtgggccccccacccttccttaagaagaccttcgaaatggttgaggacccttgcactgaccccattgtgtcctggagccaaactcgtgatagtttcatcgtttgggactctcacgaattctccaaaactcttctccccagatacttcaagcacagcaatttctccagctttgttcgacagcttaatacctatggctttaggaaggttgattcggaccgttgggagtttgcaaatgaaggattccaaggagggaagaagcacttgctgaagaacataaggaggaggagtaagtataacaagctgcatcagggagcgttcaatatgatgaagacaggcgtggaggctgaagtggagaaactgaagaaggaccagaacattttgaaggtggaaattctaaagctgaggcagcagcaggagaattcgcatgttcaactctcaaattttcaggaaagaattcggtgtgctgagatgaagcagtttcagatgatgtatttcctcaccagaatggctagaaggcctgcttttgtggagcagttaatccaaacgattaggcgcaaaagagaccttgatggcccagacatggttaagaggcctagattgatgggaaccccgtgccctgtaaccttctctaaggccatggagatcgaccctaatgttgattacagacaccaaggtcatagccataaacaatttcctacattgcaatctgatctcaatggacttctgtctgaatctgtgaacaccagcagcatcggacacccaactccctctcctatggaacatgaattgtgcaactctgtgcaagggttaagggccaatagttattctagagtaaatgcgcaagaagcatcttctgcctatcatgttatgtcagaaaaactaatgagggagaattctgttgttgatgaagaactagatgtgaatgactccaatatctatcttgaattagaggacttgattaccaagccaacagattggattggaagtggattggtggaacagaccagttga 1245 0.0 MVEEVAVAVAVARVKAELLDDSESDCHDDVFSESKDSGVTEEEATTGHVKEELDDGAVNGSSSSSMAQLPKPMEGLHEVGPPPFLKKTFEMVEDPCTDPIVSWSQTRDSFIVWDSHEFSKTLLPRYFKHSNFSSFVRQLNTYGFRKVDSDRWEFANEGFQGGKKHLLKNIRRRSKYNKLHQGAFNMMKTGVEAEVEKLKKDQNILKVEILKLRQQQENSHVQLSNFQERIRCAEMKQFQMMYFLTRMARRPAFVEQLIQTIRRKRDLDGPDMVKRPRLMGTPCPVTFSKAMEIDPNVDYRHQGHSHKQFPTLQSDLNGLLSESVNTSSIGHPTPSPMEHELCNSVQGLRANSYSRVNAQEASSAYHVMSEKLMRENSVVDEELDVNDSNIYLELEDLITKPTDWIGSGLVEQTS 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03648 414 ProSitePatterns HSF-type DNA-binding domain signature. 123 147 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste6g03648 414 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 70 300 IPR027725 -
Pste6g03648 414 Gene3D - 77 174 IPR036388 -
Pste6g03648 414 MobiDBLite consensus disorder prediction 28 55 - -
Pste6g03648 414 SMART hsfneu3 80 173 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste6g03648 414 PRINTS Heat shock factor (HSF) domain signature 122 134 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste6g03648 414 PRINTS Heat shock factor (HSF) domain signature 135 147 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste6g03648 414 PRINTS Heat shock factor (HSF) domain signature 84 107 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste6g03648 414 SUPERFAMILY "Winged helix" DNA-binding domain 80 173 IPR036390 -
Pste6g03648 414 MobiDBLite consensus disorder prediction 24 68 - -
Pste6g03648 414 Pfam HSF-type DNA-binding 84 173 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste6g03648 414 FunFam Heat shock transcription factor 1 77 174 - -
Pste6g03648 414 Coils Coil 195 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03648 Pste-Chr6 25647661 25649839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03648 70 404 HSF AT2G26150 41.813 1.06e-84 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pste6g03648 HSF_DNA-bind 8.8e-33 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03648 6 25647661 25649839 Pste6g03648 6 25647661 25649839 ECH