Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03644 atggaacctcgtgttgggaataagtttcgcctgggtcgaaagatcggaagcggctccttcggggagatctatttaggcactaatattcaaacaaacgaagaggtcgcaattaagcttgcggtttcctgtgaaattagtttttgctttgaattgcgtgcaaggggttgtgaaattcggtttgaggaaaatgtcaagacaaagcatcctcagttgctgtatgagtccaagttgtacagaattctccagggaggaactgggattccaaatgttagatggtttggagtggagggagattacaatgttttagtgatggatctacttggacccagtcttgaagatctatttaacttctgtagtagaaagctatcactaaagacagttctcatgcttgctgatcaaatgatcaaccgtgtcgagttcattcattcaaaatcatttctgcatcgagatatcaaaccggataactttctaatgggattaggaaggcgcgcaaaccaggtttatgctattgattttggtttggctaagaaatacagagataattcaacacatcaacacattccttacagggaaaataagaatttgactggaacagcaagatatgctagcatgaatactcaccttggcattgagcaaagcagaagagatgatcttgagtctcttggttatgtgttgatgtacttcttgagaggaagtcttccttggcagggtctcaaagccggaacaaagaaacagaagtacgagaaaatcagtgaaaaaaaggtttctacctcgattgaagccttgtgtcgaggttatccaacagaatttgcatcttacttccactactgccgatcgttaaggtttgatgataagccagattatgcttacctcaaaaggatatttcgtgacttgtttattcacgaaggattccagtttgattatgtctttgactggactattttgaagtatcagcaatcacagctagccactcctcctacacgggccattggccctagtgctggaactagttctggaatgcccccagctgttactaatgccgataggcatacaggaggcgaagaagggcgacctcctgctctggtttcagtggattcctcaaggcgcagaatgaatttagctagtgccaatgtcttgggtcaatcaagtggatcgtcaaggcgagttgctgtttctggtagccgtgatgcatttgttggtaccgagtcagatattcgtactcgcactgctgaggctagccctggagcagcacacagaggtttgagtgggcaaagaagttcaccaattggatcttctgatcccaagagagttgtatcatccgggagaaatgcttctcatgtgaaaaattatgacactgcacttaggggcatggaagtgccaaaattgcttatgttgctgagtcgtgctgtgaggaaatttggatctgaacttgaaattctggctttgtattgttaa 1455 0.0 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLAVSCEISFCFELRARGCEIRFEENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHSKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDNSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIHEGFQFDYVFDWTILKYQQSQLATPPTRAIGPSAGTSSGMPPAVTNADRHTGGEEGRPPALVSVDSSRRRMNLASANVLGQSSGSSRRVAVSGSRDAFVGTESDIRTRTAEASPGAAHRGLSGQRSSPIGSSDPKRVVSSGRNASHVKNYDTALRGMEVPKLLMLLSRAVRKFGSELEILALYC 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03644 484 Pfam Protein kinase domain 10 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03644 484 Gene3D Transferase(Phosphotransferase) domain 1 1 333 - -
Pste6g03644 484 FunFam Casein kinase I isoform delta-like 1 330 - -
Pste6g03644 484 SMART serkin_6 9 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03644 484 MobiDBLite consensus disorder prediction 325 344 - -
Pste6g03644 484 CDD STKc_CK1_delta_epsilon 8 304 - -
Pste6g03644 484 SUPERFAMILY Protein kinase-like (PK-like) 5 312 IPR011009 -
Pste6g03644 484 MobiDBLite consensus disorder prediction 400 444 - -
Pste6g03644 484 PANTHER CASEIN KINASE-RELATED 9 386 - -
Pste6g03644 484 ProSiteProfiles Protein kinase domain profile. 9 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03644 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Pste6g03644 484 MobiDBLite consensus disorder prediction 424 444 - -
Pste6g03644 484 MobiDBLite consensus disorder prediction 325 365 - -
Pste6g03644 484 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03644 Pste-Chr6 25591854 25599021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03644 8 235 MAP Kinase Kinase Kinase AT3G06030 26.271 8.46e-12 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pste6g03644 Pkinase 8e-25 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03644 6 25591854 25599021 Pste6g03644 6 25591854 25599021 ECH
Pste6g03644 6 25591854 25599021 Pste2g01336 2 14693199 14700787 PCT