Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03626 atggaggaaatatcttcgagtgttgcagtaccttttacacttggcgttggaaatttgattcaaaaggagtctgcagtgacaactcacatggagataacagggctgaagcttatggcaaatacagcagcggctgctttgatgttaaatcctgcagtggagcgttgtcaatcatattctgttggtagtgaaaatcatgccgatgttagtctgcagcaccagataacagtgtctgcagaggtaaaggagaatcaagttggagctgcccttgtctcagaaatggttattgaatgtgagagtaattgggtcttgaatgaaagctataatcaggttagaaaggaagatgaattaatgttagcagtggattttaagtgtctacatgattcaagctctcaagctgcggctaatggcaaaagtgacccttgtagggaggaagctacgttgttgaagactagttatgcggaaatagactcacctatcatcatcaaggttgatgatattgatgatcttcatggtaagtctggagcaaaagagccatgtccatcaatgaagccagtggagaacacagcttctgttgctatggatattacgagtgaggatcaaagtggatcagatgagtctgatcctaaaccatctgccgtggttcctgatcagttgccaggggagaataaaagatggaggacaagcaacccaaatacttcagacttgaatggtggtcctctctggggttgctcatcaatttgtggaatgagacaggagatggaagatgctatttctgtaaggcctcaactttttcaggttccttcaaagatgctagtaaatgaccatgtgaatgagaacgaaaaacactcactagcccacttttttggtgtctacgatggacatgggggctttcaggttgctaattactgccaggaacgtcttcattcagtattaattgaagaaatagaggctgtacaatcaagtttggctgaaacaaatgggagagatgattggcaggataattggaagaaagcattcatcaattgttttaagaaagtagatgatcaggttggaggaattggtgcaagtaatagtggaaacagtggtggatctgagtctaatgttgaacctgttgctgctgagactgctggctccactgcagtggttgccattttgagtaaaacccacatattagttgcaaattgtggagattcaagaactgtattataccgtggaaaagaagccatgccattgtcttctgaccacaaaccaaatagagaggacgagcgggcaagaatagaagcagcgggaggaagagtcatacattggaaaggatatcgagttcttggtgtcttggcaatgtcaaggtccataggtgatagatacctgaaaccatggataattccagaacctgaagtcaatatagtgtgtagagagaaaaacgatgagtgtcttattctagcaagtgatggtttatgggatgtaataagcaatgaagaagcctgtgaggttgcaaggaagcgtatccttctttggcacaagaagtatggtgataacagagcaacgggacacggtgaaggagctgatcctgcagctcagttcgctgccgattatctgagtaagcttgccatccacaggggaagccaagataacatctctgtaattgtgatagacttaaaggctcagagaaaaatcaggagaaagccatag 1689 0.0 MEEISSSVAVPFTLGVGNLIQKESAVTTHMEITGLKLMANTAAAALMLNPAVERCQSYSVGSENHADVSLQHQITVSAEVKENQVGAALVSEMVIECESNWVLNESYNQVRKEDELMLAVDFKCLHDSSSQAAANGKSDPCREEATLLKTSYAEIDSPIIIKVDDIDDLHGKSGAKEPCPSMKPVENTASVAMDITSEDQSGSDESDPKPSAVVPDQLPGENKRWRTSNPNTSDLNGGPLWGCSSICGMRQEMEDAISVRPQLFQVPSKMLVNDHVNENEKHSLAHFFGVYDGHGGFQVANYCQERLHSVLIEEIEAVQSSLAETNGRDDWQDNWKKAFINCFKKVDDQVGGIGASNSGNSGGSESNVEPVAAETAGSTAVVAILSKTHILVANCGDSRTVLYRGKEAMPLSSDHKPNREDERARIEAAGGRVIHWKGYRVLGVLAMSRSIGDRYLKPWIIPEPEVNIVCREKNDECLILASDGLWDVISNEEACEVARKRILLWHKKYGDNRATGHGEGADPAAQFAADYLSKLAIHRGSQDNISVIVIDLKAQRKIRRKP 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03626 562 CDD PP2Cc 242 552 IPR001932 -
Pste6g03626 562 ProSiteProfiles PPM-type phosphatase domain profile. 240 552 IPR001932 -
Pste6g03626 562 Gene3D - 231 562 IPR036457 -
Pste6g03626 562 Pfam Protein phosphatase 2C 263 545 IPR001932 -
Pste6g03626 562 ProSitePatterns PPM-type phosphatase domain signature. 287 295 IPR000222 GO:0043169
Pste6g03626 562 MobiDBLite consensus disorder prediction 222 236 - -
Pste6g03626 562 MobiDBLite consensus disorder prediction 197 236 - -
Pste6g03626 562 SUPERFAMILY PP2C-like 237 553 IPR036457 -
Pste6g03626 562 SMART PP2C_4 230 550 IPR001932 -
Pste6g03626 562 FunFam Protein phosphatase 2C 16 229 562 - -
Pste6g03626 562 PANTHER PROTEIN PHOSPHATASE 203 552 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03626 Pste-Chr6 25380043 25384824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03626 41 561 PP2C-type Phosphatase Gene Family AT1G17550 44.487 1.57e-134 399
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03626 6 25380043 25384824 Pste6g03626 6 25380043 25384824 ECH
Pste6g03626 6 25380043 25384824 Pste2g01316 2 14491630 14496421 PCT