Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03625 atgaagaaaggaaacttgggccttggtctcaaactctctgttcctgtctctgatcaatctaattttgccaagttcctgactgaaagtgggacttttaaggctggggatctccttgtcaacagggatggagttcgaattgtctctcagaatgatgtcgaagctccacctccaatcaagcctacagacgaccagttaactttggctgacatagatgtaatcaaagttgttggaaagggagctggaggggtggtccaattggtacagcacaaatggactagtcagttttttgcattgaaggtaattcaaatgaatattgaggagtctatgcgcaagcagatcgcacaagagctgaaaattaatcaacaagcacaatgtcctcatgttgttgtctgctaccaatctttctatgaaaacggtgtcatatcaatcatcttagagtacatggatggaggttccttagatgatctgctgaagaaagtaaaaactattccggagccttttcttgctgccatctgtaagcaggtgctgaatggtttaatatatctccaccatgaaaagcatattatccacagagacctaaaaccttctaatttgctaataaatcatataggtgaagtaaagattactgactttggtgtgagtgcaattatggatagtacatctggtcaagcaaatactttcattggcacttacaactatatgtctccagagagaatcaatggaagcccgagaggttacaactacaaaagtgatatatggagtttgggactaatattgcttgaatgtgctttggggcggtttccatatgcaccgcctgatcaaagtgaaagatgggaaagcatgtttgaacttattgaaaccattgtggataaacctcctcctattcctccatctgaacaattttctagagaattttgctcatttatctcagcatgtctacagaaagacccaaaggatcgactgtcagctcaggaattaatgggacattcttttgtcagcatgtatgatgacttggaggtggatctttcagcttacttctccaatgcaggatctcctcttgcaaccttaaattgtatgttccagtcttggactatattatcataa 1104 0.0 MKKGNLGLGLKLSVPVSDQSNFAKFLTESGTFKAGDLLVNRDGVRIVSQNDVEAPPPIKPTDDQLTLADIDVIKVVGKGAGGVVQLVQHKWTSQFFALKVIQMNIEESMRKQIAQELKINQQAQCPHVVVCYQSFYENGVISIILEYMDGGSLDDLLKKVKTIPEPFLAAICKQVLNGLIYLHHEKHIIHRDLKPSNLLINHIGEVKITDFGVSAIMDSTSGQANTFIGTYNYMSPERINGSPRGYNYKSDIWSLGLILLECALGRFPYAPPDQSERWESMFELIETIVDKPPPIPPSEQFSREFCSFISACLQKDPKDRLSAQELMGHSFVSMYDDLEVDLSAYFSNAGSPLATLNCMFQSWTILS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03625 367 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Pste6g03625 367 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 17 336 - -
Pste6g03625 367 SUPERFAMILY Protein kinase-like (PK-like) 62 340 IPR011009 -
Pste6g03625 367 SMART serkin_6 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03625 367 FunFam Mitogen-activated protein kinase kinase 6 151 351 - -
Pste6g03625 367 CDD PKc_MAPKK_plant_like 85 336 - -
Pste6g03625 367 ProSiteProfiles Protein kinase domain profile. 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03625 367 FunFam Mitogen-activated protein kinase kinase 6 40 149 - -
Pste6g03625 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Pste6g03625 367 Gene3D Phosphorylase Kinase; domain 1 47 149 - -
Pste6g03625 367 Pfam Protein kinase domain 72 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03625 367 Gene3D Transferase(Phosphotransferase) domain 1 150 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03625 Pste-Chr6 25375459 25379833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03625 1 327 MAP Kinase Kinase Gene Family AT4G29810 67.262 1.45e-168 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pste6g03625 Pkinase 7.3e-69 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03625 6 25375459 25379833 Pste6g03625 6 25375459 25379833 ECH
Pste6g03625 6 25375459 25379833 Pste2g01315 2 14484232 14491199 PCT