Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste6g03623 | atggtttggtttcaatgcgaagattgcggagacaacctcaaaaagcccaagttgccggctcactttcgaacatgctccgcctacaaattgtcctgcattgactgtggggagatatttgggcgtgacactgttcagaatcacacgcagtgtattaccgaagcggagaagtatggtccaaaaggtccaggcaaaaatttgaatgttgccactgccaatcctagcaaggacaatacgcaaaagcctgaagttgatattaatgtcgggttatctgagcagcctccttggttctgtagtctttgcaatacgaaagctacaagtaagcaaacccttcttctccatgctgatggaaagaaacacagagcaaaggccagagcattccatgcttcaaagcaacaaccagtccaggcagagaaatctaccactgatacaaaggttgctgtggggactgctcctaatgaagaggtgagagataacaaaaatggagaggtgccaaaattgcaagagtcttctaaacaaaataactcaaaaccagggaatgaaatatcattagcaacaaaaaagaggaaacttgaagcattagaggatgaccttattaaaaaaagcaggaatgactcttcagttgacatgggaaatggagaagtaattcagggtgaggaagcagcaggagagagcaatttgaagaaagaagggagtgctgtaaaaaataaaataaaatggaagaagttcatcaaaacagccttgaaatctcatcctgatggagttttgaagatgaagaaactgagaaaagctgtcctcaaagcattgcaggaatctggtattgtagtggttgaagctgaattgagtaagacgcttgagcagaagatcaattcaagctccagatttgcaattgagaacaagtatgtgcgattgctggccaaggattga | 924 | 0.0 | MVWFQCEDCGDNLKKPKLPAHFRTCSAYKLSCIDCGEIFGRDTVQNHTQCITEAEKYGPKGPGKNLNVATANPSKDNTQKPEVDINVGLSEQPPWFCSLCNTKATSKQTLLLHADGKKHRAKARAFHASKQQPVQAEKSTTDTKVAVGTAPNEEVRDNKNGEVPKLQESSKQNNSKPGNEISLATKKRKLEALEDDLIKKSRNDSSVDMGNGEVIQGEEAAGESNLKKEGSAVKNKIKWKKFIKTALKSHPDGVLKMKKLRKAVLKALQESGIVVVEAELSKTLEQKINSSSRFAIENKYVRLLAKD | 307 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste6g03623 | 307 | SUPERFAMILY | beta-beta-alpha zinc fingers | 30 | 58 | IPR036236 | - | |
Pste6g03623 | 307 | ProSiteProfiles | Zinc finger C2HC LYAR-type profile. | 27 | 51 | - | - | |
Pste6g03623 | 307 | PANTHER | CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR | 1 | 304 | IPR039999 | GO:0003677 | |
Pste6g03623 | 307 | MobiDBLite | consensus disorder prediction | 121 | 186 | - | - | |
Pste6g03623 | 307 | MobiDBLite | consensus disorder prediction | 132 | 147 | - | - | |
Pste6g03623 | 307 | Pfam | LYAR-type C2HC zinc finger | 30 | 57 | IPR014898 | - | |
Pste6g03623 | 307 | FunFam | UBP1-associated proteins 1C | 89 | 132 | - | - | |
Pste6g03623 | 307 | SUPERFAMILY | beta-beta-alpha zinc fingers | 1 | 26 | IPR036236 | - | |
Pste6g03623 | 307 | Gene3D | - | 1 | 50 | - | - | |
Pste6g03623 | 307 | Coils | Coil | 183 | 203 | - | - | |
Pste6g03623 | 307 | SMART | ZnF_U1_5 | 92 | 126 | IPR003604 | GO:0003676|GO:0008270 | |
Pste6g03623 | 307 | MobiDBLite | consensus disorder prediction | 165 | 181 | - | - | |
Pste6g03623 | 307 | SUPERFAMILY | beta-beta-alpha zinc fingers | 83 | 127 | IPR036236 | - | |
Pste6g03623 | 307 | Gene3D | Classic Zinc Finger | 72 | 125 | - | - | |
Pste6g03623 | 307 | ProSiteProfiles | Zinc finger C2HC LYAR-type profile. | 1 | 26 | - | - | |
Pste6g03623 | 307 | Pfam | Zinc-finger of C2H2 type | 95 | 119 | - | - | |
Pste6g03623 | 307 | FunFam | cell growth-regulating nucleolar protein-like | 1 | 50 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste6g03623 | 79 | 229 | C2H2 Transcription Factor Family | AT2G19380 | 43.046 | 4.55e-20 | 88.6 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pste6g03623 | 6 | 25347589 | 25351337 | Pste6g03623 | 6 | 25347589 | 25351337 | ECH |