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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Pste6g03608
atgtacaattgttcacaagtggattgcaatcactcgatggctcatactccgtatccttgtggtgatccttattttggtagttcattaattacttatggaccacagactattagtcaacctcaactgctaccccagattctgggattagcatccaccagaattgcattaccagatgagcttgcagaggatggacccatttatgtcaatgcaaaacaataccatggaatattgagaaggcgacagtcacgagcaaagcttgaggctcaaaacaaactcatcaaaagtcgtaagccatatcttcacgagtctcggcaccgccatgcattgaatagggttaggggatctgggggacgctttctaagtgccaaacagctgcaacagtctaaatcagaaattgtcactgatgctcatttaggcccagattctgtctacgtttatcaaaagaaagatgcatcagacgtggaaagtcacccctcaagatctagggaaaatacatctatctccgccatgtctggcttaacaatgtccagtaacagtgtcaatttcaggcagcccgagcacaacttcttggggagctcccccaacataggtggatcctcacaatgcagtgggggactcacctttggtggtggagctcggcaatgtgcttcagttggccgttga
663
0.0
MYNCSQVDCNHSMAHTPYPCGDPYFGSSLITYGPQTISQPQLLPQILGLASTRIALPDELAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKLIKSRKPYLHESRHRHALNRVRGSGGRFLSAKQLQQSKSEIVTDAHLGPDSVYVYQKKDASDVESHPSRSRENTSISAMSGLTMSSNSVNFRQPEHNFLGSSPNIGGSSQCSGGLTFGGGARQCASVGR
220
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Pste6g03608
220
PRINTS
CCAAT-binding transcription factor subunit B signature
65
87
IPR001289
GO:0003700|GO:0006355
Pste6g03608
220
PRINTS
CCAAT-binding transcription factor subunit B signature
96
119
IPR001289
GO:0003700|GO:0006355
Pste6g03608
220
PANTHER
TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED
3
181
IPR001289
GO:0003700|GO:0006355
Pste6g03608
220
ProSiteProfiles
NF-YA/HAP2 family profile.
62
122
IPR001289
GO:0003700|GO:0006355
Pste6g03608
220
Pfam
CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
65
119
IPR001289
GO:0003700|GO:0006355
Pste6g03608
220
ProSitePatterns
NF-YA/HAP2 subunit signature.
67
87
IPR018362
GO:0003677|GO:0016602
Pste6g03608
220
Gene3D
-
62
124
-
-
Pste6g03608
220
MobiDBLite
consensus disorder prediction
149
169
-
-
Pste6g03608
220
SMART
cbf3
61
122
IPR001289
GO:0003700|GO:0006355
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Pste6g03608
Pste-Chr6
25218504
25220619
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Pste6g03608
33
134
CCAAT-HAP2 Transcription Factor Family
AT1G54160
61.538
1.24e-39
136
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
NF-YA
Pste6g03608
CBFB_NFYA
2.8e-27
No_clan
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Pste6g03608
6
25218504
25220619
Pste6g03608
6
25218504
25220619
ECH
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