Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03592 atgaatggaaggaacaggttccccttcactccttcacagtggcaagagcttgagcaccaagctctcatctacaaatacatggcttcaggtatctccatcccccccgaccttctcttcaccatcaaaagaactcacttggactctcctctctcctcaaggctcttgcctcaccaacctcaacactttgggtggaactatttgccaatggggttggggaggaaaatagacccggagccagggaggtgtagaagaacagatgggaagaaatggaggtgctcaaaggaggcgtatccagattcaaagtactgcgagaggcacatgcacagagggaaaaaccgttcaagaaagcctgtggaagttttgaaaacaacaccaacgacagcaccaacaaacacagatgcctcaaccccaacaatcttatcaatcaccaaaaacagtcctgcactctccccaaccactcattctctctccgtgtcctctcatgaaaccttccatcatcatcatcaccatccttcctcccactccttcctctatcatcatcatcattccaggccttcttctggtgttgctttgtcatttcaagacaacagtgcccccttgtttctcgacaccgcttcttgctctcagaataacaacactgactgcaggaacaggtatgtgtatggactgaaagaggaggtggatgagcatgcattcttcacggaaccttctggaactatgagaagcttctctgcttcctcaatggaagattcatggcaactcacaccactgaccataagctcttcttcctcatcgaaacagaggagttgctctggtttatccaatgacaacaacgagtactcctacttgcaacttcagagcctcagtggcaacaactcaaaacagccacaacaagatcagggttgctacatatctggccctggcggtgatgtaaagtgtgaagcattcataaaacttgggaaagaagagcctcagaaaactgttcatcgcttcttcgacgaatggcccccgaaaagcagaggatcgtggcttgatttggatgataagtcatccaccacccagctttcaatttccattcccacgtcttctcatgattttgcaactttcagttcaacaacccaacgagatggttga 1134 0.0 MNGRNRFPFTPSQWQELEHQALIYKYMASGISIPPDLLFTIKRTHLDSPLSSRLLPHQPQHFGWNYLPMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTPTTAPTNTDASTPTILSITKNSPALSPTTHSLSVSSHETFHHHHHHPSSHSFLYHHHHSRPSSGVALSFQDNSAPLFLDTASCSQNNNTDCRNRYVYGLKEEVDEHAFFTEPSGTMRSFSASSMEDSWQLTPLTISSSSSSKQRSCSGLSNDNNEYSYLQLQSLSGNNSKQPQQDQGCYISGPGGDVKCEAFIKLGKEEPQKTVHRFFDEWPPKSRGSWLDLDDKSSTTQLSISIPTSSHDFATFSSTTQRDG 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03592 377 MobiDBLite consensus disorder prediction 107 181 - -
Pste6g03592 377 ProSiteProfiles QLQ domain profile. 8 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pste6g03592 377 Pfam QLQ 8 41 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pste6g03592 377 PANTHER GROWTH-REGULATING FACTOR 5 8 365 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pste6g03592 377 MobiDBLite consensus disorder prediction 163 181 - -
Pste6g03592 377 MobiDBLite consensus disorder prediction 119 159 - -
Pste6g03592 377 SMART QLQ_2 7 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pste6g03592 377 Pfam WRC 77 119 IPR014977 -
Pste6g03592 377 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03592 Pste-Chr6 25003930 25006604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03592 6 119 GRF Transcription Factor Family AT3G13960 71.053 1.14e-54 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pste6g03592 WRC 8e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03592 6 25003930 25006604 Pste6g03592 6 25003930 25006604 ECH
Pste6g03592 6 25003930 25006604 Pste2g01268 2 14042076 14043509 PCT