Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03535 atggccgctgttcgccctcttcctcttgttgttcttgttcttctcctcaagttccctttgttgtccttctccctcctggaaaacgaagcgctcctggagcttaaaaaatcgttcaccaaccaagaaacactatcctcgtgggtccccgaccagaacccgtgcatctcaaagtgggtgggagtgatatgcataaacaatgccatcatcagcctccacctctcagacctctcactctccggcaccgtcgacgtggacgccctaacaaacatccccactctccgctccgtcagcctcgtcaacaactctttctccgggcccatccctcccctcaacaaactcggtgccctcaaggccctttacctcaccgataaccacttctccggccccatcccctccgatttcttctcccagttagcctccctcaaaaaaatatggatctccaacaacaacttctccgggcccatccccacctccatagccaaccttcgcttcctcgtcgagctccacctcgagaacaaccacttctccggccccgtcccggacctcaagcaagacatcaaatccttggacatgtccaacaacaacctccaaggccccatccccgcctccatgtctcgcttcgctgcccaatccttctccaacaaccaagccctttgcggtaagcccttggataaaccgtgtgagcccactgctgaatcatctagttgggggatgaaggtccttgtcctcctcattcttgctgtcgttttggccgtcgtttttgtgttgttgcagtccaaccgtcgccgccgcgatgatgacttcagcgtcatgagtaggaatcacgtcgaggaggtcgtccatgtgcacgttcccacctctaaccatagcaggactccctctgatggcagcagccgcaaggagtcttcttccaagaaagggtcttcctcccggaccggtatcggtgaccttgtcatggtcaacgacgagaagggcgtctttggcttgcctgatttgatgaaggccgccgccgaggttctcggtaacggtggcttgggttccgcttacaaagctgccatggccaccggcctttccgtcgtcgtcaagcgtatgcgtgagatgaataaagtcagcagagacatctttgacgccgagatgagacgttttggaagactcaaaaaccccaatattttgactcccctcgcttaccattaccgcaaagaggaaaagttgtttgtcaccgaatacaagcccaaaggaagcttgttatacgtcttgcacggtgacagaggatcgagtcatggggacctgaactggccaatccgtttgaatattgtcaagggaattgcacgagggttgggctttctttattcagaattttctaacgaagacctaccacatggaaacctgaaatccagcaatgttttgctatctgataagtacgaggctctcctaagcgactttgcctttcatccactcataaaccccaactacgccgtgcaaacaatgtttgcctacaaaactcctgattacgtaacataccaacgtgtttcacaaaaaaccgacgtttattgcctgggaattatcattctggaaattatcaccgggaaattcccctctcaatatcacagtaatggcaagggtggcactgatgtggtgcaatgggtgttcactgcaatatctgatagaagagaggcagaattgattgacccagagttaacgagcagtcacccaaaatccctcaatcagatgctgcaactgctccaagtaggggctgcttgcacagagaacaaccccgaccaacgacttaatatgaaggaagccattaggaggatagaggaggttcaggtttaa 1833 0.0 MAAVRPLPLVVLVLLLKFPLLSFSLLENEALLELKKSFTNQETLSSWVPDQNPCISKWVGVICINNAIISLHLSDLSLSGTVDVDALTNIPTLRSVSLVNNSFSGPIPPLNKLGALKALYLTDNHFSGPIPSDFFSQLASLKKIWISNNNFSGPIPTSIANLRFLVELHLENNHFSGPVPDLKQDIKSLDMSNNNLQGPIPASMSRFAAQSFSNNQALCGKPLDKPCEPTAESSSWGMKVLVLLILAVVLAVVFVLLQSNRRRRDDDFSVMSRNHVEEVVHVHVPTSNHSRTPSDGSSRKESSSKKGSSSRTGIGDLVMVNDEKGVFGLPDLMKAAAEVLGNGGLGSAYKAAMATGLSVVVKRMREMNKVSRDIFDAEMRRFGRLKNPNILTPLAYHYRKEEKLFVTEYKPKGSLLYVLHGDRGSSHGDLNWPIRLNIVKGIARGLGFLYSEFSNEDLPHGNLKSSNVLLSDKYEALLSDFAFHPLINPNYAVQTMFAYKTPDYVTYQRVSQKTDVYCLGIIILEIITGKFPSQYHSNGKGGTDVVQWVFTAISDRREAELIDPELTSSHPKSLNQMLQLLQVGAACTENNPDQRLNMKEAIRRIEEVQV 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03535 610 Pfam Leucine rich repeat 116 175 IPR001611 GO:0005515
Pste6g03535 610 Pfam Protein kinase domain 338 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03535 610 ProSiteProfiles Protein kinase domain profile. 334 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03535 610 Gene3D Ribonuclease Inhibitor 135 184 IPR032675 -
Pste6g03535 610 Gene3D Ribonuclease Inhibitor 26 134 IPR032675 -
Pste6g03535 610 Pfam Leucine rich repeat N-terminal domain 29 63 IPR013210 -
Pste6g03535 610 SUPERFAMILY L domain-like 27 211 - -
Pste6g03535 610 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 609 IPR046959 -
Pste6g03535 610 MobiDBLite consensus disorder prediction 279 314 - -
Pste6g03535 610 Gene3D Transferase(Phosphotransferase) domain 1 411 610 - -
Pste6g03535 610 Gene3D Ribonuclease Inhibitor 187 227 IPR032675 -
Pste6g03535 610 FunFam Nuclear pore complex protein NUP107 25 181 - -
Pste6g03535 610 SUPERFAMILY Protein kinase-like (PK-like) 338 605 IPR011009 -
Pste6g03535 610 Gene3D Phosphorylase Kinase; domain 1 308 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03535 Pste-Chr6 24274718 24277610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03535 13 610 Receptor kinase-like Gene Family AT3G42880 50.000 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste6g03535 Pkinase 6.7e-26 CL0016