Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03519 atgcaaacagcacgaaaccacactctggccttcacgctcttgctcctgttgctatctgcgccacgcgccgccgcagcaaggccacagcgagatctgctccggtcatggtgcgcgcaggccaggtacccagtcctttgcgtccaaaccctctccaactcctcgaacctggccaccaagcccctggacctggcccaagccgccgtcaaggttagcctgtcccacgcacgcaccctcttcctttacttcagcgccctaaatgccacctcgtcacgcttcggacagaggcagcgagttgcggtgagtgactgcgtggagcagatatccgactcgctgactcagttgaggaagacgctgaacgagttgcagcacctccgcgccggaaccttccagtggcagatgagcaacgcacagacgtggaccagcgccgccctcaccaacggcgacacctgtctcaccggcttcaacgaaggcgtcggcggcggcgacgggaagttgaagatggaggtgaagcttagggtgagggacgtagcaatgatcacgagtaacgcgttgtatctgatcaatcgcctcagtgatagcgtgagtgggaagcctcgcaccaatttccggaactga 615 0.0 MQTARNHTLAFTLLLLLLSAPRAAAARPQRDLLRSWCAQARYPVLCVQTLSNSSNLATKPLDLAQAAVKVSLSHARTLFLYFSALNATSSRFGQRQRVAVSDCVEQISDSLTQLRKTLNELQHLRAGTFQWQMSNAQTWTSAALTNGDTCLTGFNEGVGGGDGKLKMEVKLRVRDVAMITSNALYLINRLSDSVSGKPRTNFRN 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03519 204 CDD PMEI-like_3 35 191 - -
Pste6g03519 204 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 186 - -
Pste6g03519 204 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 192 IPR035513 -
Pste6g03519 204 FunFam Pectinesterase inhibitor 3 28 191 - -
Pste6g03519 204 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 191 IPR035513 -
Pste6g03519 204 Coils Coil 104 124 - -
Pste6g03519 204 Pfam Plant invertase/pectin methylesterase inhibitor 31 185 IPR006501 GO:0004857
Pste6g03519 204 SMART PMEI_2 28 186 IPR006501 GO:0004857
Pste6g03519 204 NCBIfam pectinesterase inhibitor domain 9 190 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03519 Pste-Chr6 24044992 24046006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03519 32 193 Carbohydrate Esterase AT3G14310 26.220 1.21e-14 70.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03519 6 24044992 24046006 Pste6g03519 6 24044992 24046006 ECH