Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03488 atggcatcaaggaaagcttttacccaatgcttggttctcccgatcttgctgatgctgggtcaatgtgataagccactgaacacagaagaaggagaggatttggtcacagcaacctgcaaacacaccctttatgtccaactatgcatttcttccatgagatcagtccctgagagtagcaagacatcagatctaaaagtgcttgctaagattgcattgaatcttagcacaacatatgctgcagacactttgtcctatgttcatgagctgcagtctaattcttctgctgccaatggctccaacaacatttacgtgtctcgttgtttaagtgattgtgtagaggaatactcggaagccatagagaacttgcagaactcaatagaagcacttgcatatggagattgtgacaaagttgacacgttggtttctgctgccatgtctgatgctgagacatgtgaggatggcttcaaggacatgcaaattgaagacactgattccacctctcctcttactgagcgtaaccattacttctctgaactctgtagcaatgctcttgccattacaaaactactagtctga 576 0.0 MASRKAFTQCLVLPILLMLGQCDKPLNTEEGEDLVTATCKHTLYVQLCISSMRSVPESSKTSDLKVLAKIALNLSTTYAADTLSYVHELQSNSSAANGSNNIYVSRCLSDCVEEYSEAIENLQNSIEALAYGDCDKVDTLVSAAMSDAETCEDGFKDMQIEDTDSTSPLTERNHYFSELCSNALAITKLLV 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03488 191 CDD PMEI-like_1 34 190 - -
Pste6g03488 191 NCBIfam pectinesterase inhibitor domain 13 190 IPR006501 GO:0004857
Pste6g03488 191 FunFam Invertase/pectin methylesterase inhibitor family protein 30 191 - -
Pste6g03488 191 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 191 IPR035513 -
Pste6g03488 191 Pfam Plant invertase/pectin methylesterase inhibitor 33 186 IPR006501 GO:0004857
Pste6g03488 191 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 190 IPR035513 -
Pste6g03488 191 PANTHER PECTINESTERASE INHIBITOR-LIKE 26 190 - -
Pste6g03488 191 SMART PMEI_2 30 186 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03488 Pste-Chr6 23594277 23595189 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03488 24 186 Carbohydrate Esterase AT5G53370 27.011 4.48e-09 53.1