Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03487 atggcgtttcaagactttgacctcatctcagagcggcgaagaaatgagaagaggcagaggatgaggaagaggatcatgattgccgtggtttcttccgttgtcctggttgccatgataggtgcagtactctttgtggtggttagaaacgacgacactgccaccagtaacaagactaacagtaaaaagtcatcaacaaataataataataataataataataataataacaaccatgcacaacaatcttcctctggaaaggaggtggcgcactcggagaaggttgtgaaattggtgtgcagctcggcggacttcaaggaccaatgtgaagaacccctgaacaaggccatgcagggtgactccaaactcaaagaacccaaagaccttctccagatgtatgtcaaatttgctgaggatgaggttagcaaggccttcaacaaaaccatcaacatgaagttcgagactgagcaagagaaaggagccttggaagactgcaagaagctctttcaggatgccaaggatgacattgcaacctccatttcagaactctccaaaacagactcgaagaatatttctgataggactcctgatttcaacagctggctcagtgctgtcatctccttccaacaggactgtgtcgatggcttccctgagggtaacaggaagattgaacttcagaatctctttcaggattccaggcaattcattagcaactccctcgccattctctctcacgtcgcttccgctttttcttccctccaaaccactgtttctgctgctgcacgtggtcgttccttgctctccaactcccctgctgcttctcttgacaaaaatgattcccttccctcttggctcacccttgaggaccgaagaatcttgaaggctatcgataacaaacccacccctaatgttactgtctccaaagacggctctgctaacttcaaaaccatctctgaatgtttgaatgctatccctcaaaattttcaaggacgctatgtgatttatgttaaagaaggaatatacgatgagcaagtcacagtaacaaagcaaatgcaaaacataaccatgtatggtgatggatcccaaaagagcatcatcactggcagcaaaaactttagggacggtgtcaggaccttccaaactgcaagttttgtggtagagggagatggattcataggcatggcaatgggattcagaaacactgcaggagcagatgggcaccaagcagtggctgcaagagtgcagtcagatcgtacagtgtttgccaactgtcgttttgagggttaccaagacactctatacacacaagcccacagacaattctacaggagctgcatcattacaggcacaattgactttatctttggggatgcagctgtagtgttccaaaattgcatcatgattgtaaggaagccattggacaaccaacaaaacatggtgactgcacaagggagaatggacaaacaacaagcaactggaattgtgctacagaagtgcacaatcaaacctgacgactcactaattccagttaaggacaagatcaggagctaccttgggaggccatggaaggaatactcaagaaccattgttatggaatcagaaataggtgacttcattcatcctgatggatggacagcatggatgggagattttgcactcaatacattgtattatgctgagtatgctaacacagggcctggtgccgccaccggtgctaggatcaagtggcctggttaccaggtcattaataaggatgaggccaccaagttcacagtgggctctttcttgaagggcacatggctccagaacacaggagttccttctgttcaaggcttgtacgattaa 1842 0.0 MAFQDFDLISERRRNEKRQRMRKRIMIAVVSSVVLVAMIGAVLFVVVRNDDTATSNKTNSKKSSTNNNNNNNNNNNNHAQQSSSGKEVAHSEKVVKLVCSSADFKDQCEEPLNKAMQGDSKLKEPKDLLQMYVKFAEDEVSKAFNKTINMKFETEQEKGALEDCKKLFQDAKDDIATSISELSKTDSKNISDRTPDFNSWLSAVISFQQDCVDGFPEGNRKIELQNLFQDSRQFISNSLAILSHVASAFSSLQTTVSAAARGRSLLSNSPAASLDKNDSLPSWLTLEDRRILKAIDNKPTPNVTVSKDGSANFKTISECLNAIPQNFQGRYVIYVKEGIYDEQVTVTKQMQNITMYGDGSQKSIITGSKNFRDGVRTFQTASFVVEGDGFIGMAMGFRNTAGADGHQAVAARVQSDRTVFANCRFEGYQDTLYTQAHRQFYRSCIITGTIDFIFGDAAVVFQNCIMIVRKPLDNQQNMVTAQGRMDKQQATGIVLQKCTIKPDDSLIPVKDKIRSYLGRPWKEYSRTIVMESEIGDFIHPDGWTAWMGDFALNTLYYAEYANTGPGAATGARIKWPGYQVINKDEATKFTVGSFLKGTWLQNTGVPSVQGLYD 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03487 613 PANTHER PECTINESTERASE 34 601 - -
Pste6g03487 613 Pfam Pectinesterase 302 597 IPR000070 GO:0030599|GO:0042545
Pste6g03487 613 Pfam Plant invertase/pectin methylesterase inhibitor 94 241 IPR006501 GO:0004857
Pste6g03487 613 Gene3D - 296 611 IPR012334 -
Pste6g03487 613 ProSitePatterns Pectinesterase signature 2. 446 455 IPR033131 -
Pste6g03487 613 SUPERFAMILY Pectin lyase-like 300 610 IPR011050 -
Pste6g03487 613 NCBIfam pectinesterase inhibitor domain 85 244 IPR006501 GO:0004857
Pste6g03487 613 SMART PMEI_2 90 241 IPR006501 GO:0004857
Pste6g03487 613 FunFam Pectinesterase 91 246 - -
Pste6g03487 613 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 93 244 IPR035513 -
Pste6g03487 613 CDD PMEI-like_3 97 247 - -
Pste6g03487 613 Gene3D Invertase/pectin methylesterase inhibitor family protein 91 248 IPR035513 -
Pste6g03487 613 MobiDBLite consensus disorder prediction 53 87 - -
Pste6g03487 613 FunFam Pectinesterase 296 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03487 Pste-Chr6 23588847 23591245 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03487 1 613 Carbohydrate Esterase AT4G33230 47.334 0.0 585