Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03486 atggctattccatcccctaaacttttcctccttctcttaacaatcttcttttcatgtaccacaactctgaagtcctccattgcttcctccacaaacacaaaattgcaagcaaacctctactccttaaacagaaccaactcatttcctgaagttttcttcaattcatctaagctttccatctcaataaacataaacccaaacatcatcaacacccttctccagtcactccaagcagcaatatctgaagccacaaaattatctgatctattaaagaatgctggacataacatcatagagaacaaaataggagcagtccaagactgtagagaacttcaacaatccaccttagcttccttaaaacgatcactatctgggattcgttcccaagattctagaaaactaattgatgcaagaatctacctaagtgcagccctgaccaacaaggacacgtgtctagagagcttagattctgcctcgggtacccttaagccagttctagtgaattctgtgatcaactcttacaaacatgtcggtgattctctttcaatgctccctaagcctgagaggaagtcttccaaaggacacaataaccggcgtttgttgtggttgtcaaggaaaaaccgtcgcctcttgcaaagcaatgatggggagcttgttgtggctgcagatggaacggggaactttagcaccatcactgaggctatcaactttgctccaaataacagcgttggtaggacagtaatctatgtcaaacaagggacctacgaggaaaacgttgaaatcccaagttataagaccaatattgttctgcttggcgatggaaaagatgtcacagttattactggcaacagaagtgtcattgatggctggaccactttcagatctgcaactctagctgtctctggtgagggctttctggcacgtgatataggtttagagaacaaggcaggaccagagaagcatcaagcagtggccctgagagtgaatgcagacttcacagccttttacaggtgtggcatgtatggttaccaagacactctttatgttcattccctaagacaattctacagggagtgtgacatttatgggaccatagattatatatttgggaatgcagcagtggttttccaagcatctaacatagtgtccaggatgccaatgcctggtcaattcacagtcataactgcacaatcaagaaattcccctgatgaggatactggcatttccatccaaaactgttcaattctagcaaccacagatttgtactccaattctggcagtgtcaagagctaccttgggaggccatggagggtgtattctcgcactgtttatcttgagtcctacattgatgaatttattgacccaatggggtggacccagtggtctgatgatcaaggcttggacactttgtattatggagagtataacaattatgggcctggttcgaggacagataaccgagtggattggcctggctacaatattatggattacgacagtgcctacaacttcacagtttctcagtttattattggtgatgcttggcttgggtctacttccttcccttatgatgatgccatttga 1584 0.0 MAIPSPKLFLLLLTIFFSCTTTLKSSIASSTNTKLQANLYSLNRTNSFPEVFFNSSKLSISININPNIINTLLQSLQAAISEATKLSDLLKNAGHNIIENKIGAVQDCRELQQSTLASLKRSLSGIRSQDSRKLIDARIYLSAALTNKDTCLESLDSASGTLKPVLVNSVINSYKHVGDSLSMLPKPERKSSKGHNNRRLLWLSRKNRRLLQSNDGELVVAADGTGNFSTITEAINFAPNNSVGRTVIYVKQGTYEENVEIPSYKTNIVLLGDGKDVTVITGNRSVIDGWTTFRSATLAVSGEGFLARDIGLENKAGPEKHQAVALRVNADFTAFYRCGMYGYQDTLYVHSLRQFYRECDIYGTIDYIFGNAAVVFQASNIVSRMPMPGQFTVITAQSRNSPDEDTGISIQNCSILATTDLYSNSGSVKSYLGRPWRVYSRTVYLESYIDEFIDPMGWTQWSDDQGLDTLYYGEYNNYGPGSRTDNRVDWPGYNIMDYDSAYNFTVSQFIIGDAWLGSTSFPYDDAI 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03486 527 Coils Coil 73 93 - -
Pste6g03486 527 CDD PMEI-like_3 72 183 - -
Pste6g03486 527 FunFam Pectinesterase 212 527 - -
Pste6g03486 527 FunFam Pectinesterase 35 186 - -
Pste6g03486 527 SMART PMEI_2 34 183 IPR006501 GO:0004857
Pste6g03486 527 PANTHER PECTINESTERASE 63 517 - -
Pste6g03486 527 SUPERFAMILY Pectin lyase-like 216 523 IPR011050 -
Pste6g03486 527 Gene3D Invertase/pectin methylesterase inhibitor family protein 46 186 IPR035513 -
Pste6g03486 527 Pfam Plant invertase/pectin methylesterase inhibitor 75 178 IPR006501 GO:0004857
Pste6g03486 527 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 67 184 IPR035513 -
Pste6g03486 527 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Pste6g03486 527 ProSitePatterns Pectinesterase signature 2. 361 370 IPR033131 -
Pste6g03486 527 Pfam Pectinesterase 218 513 IPR000070 GO:0030599|GO:0042545
Pste6g03486 527 Gene3D - 213 527 IPR012334 -
Pste6g03486 527 NCBIfam pectinesterase inhibitor domain 55 177 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03486 Pste-Chr6 23584837 23587032 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03486 41 527 Carbohydrate Esterase AT2G26440 66.012 0.0 672