Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03485 atgcaacgtactttcttatggggcggtaataatagtcagtcaaaaattgcatgggtgaaatgggaaaaagtttgtagaccaaaagatgagggagggctaggagtgaagtgtctggagaaattcaatttgagcttgttggcaaaatggaggtggagaatattaacagatgaggcggctatttggggacccttattgagaagtcggtacaggaaggcagagggttttgtggtgaggcctgcgtcttttggccaaacatcgaagtggtggaaagacatatgggccattgatggaccaaatgcgacctcctggatggttcaacacgaattaatggatagacaagcgcgatacagaaggccatctatgatcatggaaatgggtctggcagagggagttattcgtttgggagaagcaattgcttcgggctttacaggaggcggcggatataaggtgttgaatgaaggagtatccgatataggaatcaacgttgtcgactcccgggatctacgagggtggaagcgagctgccgtcaaaggtacttgttgttctccggagattgctaagggacgattacccatcgctgaaaatcacgaggagaaggattcagaaccgtgctcaattcatctgtatgcacaccgctgctgcaggatccgaatcaactgctttctattatcctgcctgggtggtgggaacgaggaaggaaaagtacagatgggtgttccttcagtaaagcagcgactgacactgacactgacactgacactgacactgagctttctggcattggcggtggctgcggctgctccaagcgccaccgatttcggcggttcagcctgcctcaaagtttcccccacacacttcggtgcctccgtcagccaagtgaccggtgtcattaaacaagtggcttccattctctcgcgcttctccccgcctcccttctccaacttccgtgtggccaccgccgttgccgactgcctcgacctgctggacctctcctccgacgtcctctcttgggccctctccgcctcccaaaaccctcaagggaaacataacagcacggggaacctgagctccgatttgaggacatggctgagtgcggtgcttgctcatccagagacatgcatggagggtttccaagggacaaataccatagtcaagggtttggtctccgctggaatcgggcaagttatgtcgttggtggaggagcttcttgcgcaggtcgtgtccgtgcccctgcaggatgccaaggcccaatttccttcctgggttaggcccatggataggaagctgcttcaatcaattggagttggagtgagtcctgatgctgtggttgctttggatgggagtgggaactacgctaagatcatggacgctgtgcttgcagcaccggattatagcatgaagcgttttgttatacacataaagaagggtgtttataatgagaacgtcgagatcaagcgtaagaagtggaatattatgatcattggagatgggatggatgccaccattgtctccggtaactggaatgtcatcgacggttggactaccttccgatcagctacgttcgctgtgagtgggagggggttcatagcaagagacatttccttccagaacaccgcagggcccgagaagcaccaagcagtggcactaagatcagactctgacctttctgtgttcttccggtgtgggatttacggtttccaagacagtctatacacccacaccatgcgccaattcttcagagaatgcacaatcagtggcaccgtggattacatctttggtgacgccacggccatgttccaaaactgcttggtacgagtgaagaaaggcttgccaaatcaaaagaacacaatcacagctcatggtagaaaagacccaaatgaaccaaccggtttctcgttccaattctgcaacataacagcagattctgaccttatgccctttgtcagcaccaccgaaacgtacctgggaagaccctggaaaacttattcacgaacggttttcatgcaatcgtacatgagtgaggtgataaggccagaagggtggctggagtggaatggaaactttgctgtggacacactgtactatgctgagtatatgaacactgggccaggtgctggactagctaaccgtgtcaaatggccagggtaccatccattgaatgattcaagtcaggctagtaacttcacagtagctcaatttattgaggggaatctatggttgccatccacgggagtaaagtacactgctgcattcacagcttaa 2262 0.0 MQRTFLWGGNNSQSKIAWVKWEKVCRPKDEGGLGVKCLEKFNLSLLAKWRWRILTDEAAIWGPLLRSRYRKAEGFVVRPASFGQTSKWWKDIWAIDGPNATSWMVQHELMDRQARYRRPSMIMEMGLAEGVIRLGEAIASGFTGGGGYKVLNEGVSDIGINVVDSRDLRGWKRAAVKGTCCSPEIAKGRLPIAENHEEKDSEPCSIHLYAHRCCRIRINCFLLSCLGGGNEEGKVQMGVPSVKQRLTLTLTLTLTLSFLALAVAAAAPSATDFGGSACLKVSPTHFGASVSQVTGVIKQVASILSRFSPPPFSNFRVATAVADCLDLLDLSSDVLSWALSASQNPQGKHNSTGNLSSDLRTWLSAVLAHPETCMEGFQGTNTIVKGLVSAGIGQVMSLVEELLAQVVSVPLQDAKAQFPSWVRPMDRKLLQSIGVGVSPDAVVALDGSGNYAKIMDAVLAAPDYSMKRFVIHIKKGVYNENVEIKRKKWNIMIIGDGMDATIVSGNWNVIDGWTTFRSATFAVSGRGFIARDISFQNTAGPEKHQAVALRSDSDLSVFFRCGIYGFQDSLYTHTMRQFFRECTISGTVDYIFGDATAMFQNCLVRVKKGLPNQKNTITAHGRKDPNEPTGFSFQFCNITADSDLMPFVSTTETYLGRPWKTYSRTVFMQSYMSEVIRPEGWLEWNGNFAVDTLYYAEYMNTGPGAGLANRVKWPGYHPLNDSSQASNFTVAQFIEGNLWLPSTGVKYTAAFTA 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03485 753 Pfam Plant invertase/pectin methylesterase inhibitor 288 409 IPR006501 GO:0004857
Pste6g03485 753 Gene3D - 435 751 IPR012334 -
Pste6g03485 753 FunFam Pectinesterase 435 751 - -
Pste6g03485 753 ProSitePatterns Pectinesterase signature 1. 465 484 IPR018040 -
Pste6g03485 753 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 287 399 IPR035513 -
Pste6g03485 753 SUPERFAMILY Pectin lyase-like 436 748 IPR011050 -
Pste6g03485 753 PANTHER PECTINESTERASE 285 741 - -
Pste6g03485 753 ProSitePatterns Pectinesterase signature 2. 584 593 IPR033131 -
Pste6g03485 753 SMART PMEI_2 269 405 IPR006501 GO:0004857
Pste6g03485 753 Pfam Pectinesterase 440 737 IPR000070 GO:0030599|GO:0042545
Pste6g03485 753 CDD PMEI-like_4 271 410 - -
Pste6g03485 753 Gene3D Invertase/pectin methylesterase inhibitor family protein 280 408 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03485 Pste-Chr6 23560047 23565573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03485 267 753 Carbohydrate Esterase AT3G43270 60.757 0.0 657