Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03469 atggctggtgtgaaccccgaggctgctggtctgaaggtttatccctctgttatggagactgttcttgagcttcacactgttagtgttgatggaaggagtgatgatgcctccctcatgcatttccctgccatcaggccagtggcagcgcgatcatctggacagaataaagtgactcctagtccaactatgtttaccatcctctataagggtaacatgtgtatctacgaaggaattcctgcagaaaaggtgcgcgaaatactgttgattgcttctgtctctgccaagtctgctgaaatgaagagtgggatccctttgacttcactcatcaccaaaggcccttcttctccacaggataactctactaacctgtctgcatcccaatcagtctgttttcctgcaaagaagagttccattggcaggttgcaagatgagtttccattagcacgcagacaatcacttcaaaggtttcttgaaaagcgaagatacaggttggctaacagagccccttatgccgccgcaaaaaaagtggttcacaacttctatcctgacagcacaccagattttggttccttgaactatccgaataaggatttcagcctcctgttgttgcctctttag 618 0.0 MAGVNPEAAGLKVYPSVMETVLELHTVSVDGRSDDASLMHFPAIRPVAARSSGQNKVTPSPTMFTILYKGNMCIYEGIPAEKVREILLIASVSAKSAEMKSGIPLTSLITKGPSSPQDNSTNLSASQSVCFPAKKSSIGRLQDEFPLARRQSLQRFLEKRRYRLANRAPYAAAKKVVHNFYPDSTPDFGSLNYPNKDFSLLLLPL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03469 205 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 45 173 IPR040390 -
Pste6g03469 205 SMART tify_2 57 92 IPR010399 -
Pste6g03469 205 Pfam tify domain 59 91 IPR010399 -
Pste6g03469 205 Pfam Jas motif 146 170 IPR018467 -
Pste6g03469 205 ProSiteProfiles Tify domain profile. 57 92 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03469 Pste-Chr6 23403281 23405970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03469 61 170 Tify Gene Family AT5G20900 38.739 1.15e-19 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pste6g03469 tify 5e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03469 6 23403281 23405970 Pste2g01156 2 12571933 12574775 PCT