Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03451 atggcttcaattctcattcttttcttcactctccttcttaccttcttcctcccttttaaatctcacccctcttcagattccccctcatggatcaaggccggttattactattcaggcaatgaaatttctgcttcagacatagaagccacgctttttactcacctcttgtgtgcttttgcattcataaactccaccagctacaacatcttcatcaactcttctgaggagcacaagttctcctccttcaccaatacggtaaagcttcgaaatccatctctttcaacgcttctatccatctgggtcggcagagaggacacttcagtattttccttaatgctaaatcgaccttctcataggaagtttttcattgattcttcaatccaaaaagcaagattctatggctttcatggcatagacctcactggggcgtggccaaggcaagagggttcagaggttacaaattttggaacccttttgaaggaatggcgtgctgcaataacttctgaggcaagaaactctagcaagccagagttgttgttggtgatggcaggttactaccttaaagcttcagactccttgagctacccctttgattcaatgcaggagaatttggattgggtgcattttgtggcatatgatttctatcttcctaggagggacaatttcacggcttttcatgcggctttgtatggttcatctggttgggataacactgatgctggcatcaaagagtggaggaggagggggttttcttctatgaagctgttaatcgggttgccttatcatggatatgcatggacacttgtgagccctggagcaaacagtggcgtgggaacacctgcgtcaggacctgccgttacaatggacggttccatggcttataagttgataaagagttacattagaagctttggaaatgtagttgctccacattacaatgctacttttgtggtgaagcagttcactgttgcgtccaccacctgggttaattttgatgatgtggaggtcatcagggccaaagtttcttatgcaagggaaaatgggctacttggttacaacgtgttccaagtaggcaatgacgaaaattgggaactttcaaggggggcagctcaagaagtagaaggagatcattataagaggaggttggtgataattattctgtttgcaactctgactttagctcttctgtttggaatagtattttgttgctaccaccgaggaatagtagccaccgttacaaaaataatatacaaactgatatatttattagaagcagaaaaggatatcgatggaaatgcttctgatctgatagcattcagttatctcacaattaaagtggcaacaaacaacttctcaaaagataataagcttggagagggtggatttggcacagtgtacaagggcaaattacggaagggtcaggaaatagctgtaaaaagactctcagaaacctcaaatcaaggccttgaagagttcaagaatgagataacgcttacagcaagactacaacacgtgaatttagttagacttctgggttactgcacaaaaagggatgaaaagattctgatctatgaatacctgccaaacaaaagcttagatcatttcctttttgatccaaggaaatcaattcttttagactggaacaagcgtgtgaatatcattgaaggagtaactcaaggccttctttatctccaagagtactcaaatttcactataatccaccgagatcttaaagctagtaatgttttgttagatcaggatatgaacccaaagatatcggattttggtatggctagaattttcaggaaatatgaccttgaagcaaacactagcaggatcgttggaacatatgggtatgtacctcctgagtatgtgaaaaaaggcatatactcaacaaagtacgatgtttatagttttggggttcttctcttgcaaatcataagcggaaaaaggacttcgcgttattatggcgcgcatgaaaatatgacccttttggaatatgcatatgagctgtggagagaaggtagaggtgtggaatttgttgatccttcattggatgatacaaactcgccttgtaaaatcatgagatgcatgcatgtggctctgttgtgcgttgaagagaactcggctgatagaccttctatgttggaagttgattcactacttaagaatgaaggtgcagctattgatactcccaaaatgcctgcattttcagttacgaaacgtgaagatgatgaagaaacatctcgcagtggaatcaaactttattccatcaacgatgttacaatttctcaactggcaccaagatga 2310 0.0 MASILILFFTLLLTFFLPFKSHPSSDSPSWIKAGYYYSGNEISASDIEATLFTHLLCAFAFINSTSYNIFINSSEEHKFSSFTNTVKLRNPSLSTLLSIWVGREDTSVFSLMLNRPSHRKFFIDSSIQKARFYGFHGIDLTGAWPRQEGSEVTNFGTLLKEWRAAITSEARNSSKPELLLVMAGYYLKASDSLSYPFDSMQENLDWVHFVAYDFYLPRRDNFTAFHAALYGSSGWDNTDAGIKEWRRRGFSSMKLLIGLPYHGYAWTLVSPGANSGVGTPASGPAVTMDGSMAYKLIKSYIRSFGNVVAPHYNATFVVKQFTVASTTWVNFDDVEVIRAKVSYARENGLLGYNVFQVGNDENWELSRGAAQEVEGDHYKRRLVIIILFATLTLALLFGIVFCCYHRGIVATVTKIIYKLIYLLEAEKDIDGNASDLIAFSYLTIKVATNNFSKDNKLGEGGFGTVYKGKLRKGQEIAVKRLSETSNQGLEEFKNEITLTARLQHVNLVRLLGYCTKRDEKILIYEYLPNKSLDHFLFDPRKSILLDWNKRVNIIEGVTQGLLYLQEYSNFTIIHRDLKASNVLLDQDMNPKISDFGMARIFRKYDLEANTSRIVGTYGYVPPEYVKKGIYSTKYDVYSFGVLLLQIISGKRTSRYYGAHENMTLLEYAYELWREGRGVEFVDPSLDDTNSPCKIMRCMHVALLCVEENSADRPSMLEVDSLLKNEGAAIDTPKMPAFSVTKREDDEETSRSGIKLYSINDVTISQLAPR 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03451 769 ProSitePatterns Protein kinases ATP-binding region signature. 457 479 IPR017441 GO:0005524
Pste6g03451 769 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 30 376 IPR001223 GO:0005975
Pste6g03451 769 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 363 766 - -
Pste6g03451 769 Gene3D - 261 331 IPR029070 -
Pste6g03451 769 Gene3D Transferase(Phosphotransferase) domain 1 527 733 - -
Pste6g03451 769 SUPERFAMILY Protein kinase-like (PK-like) 435 743 IPR011009 -
Pste6g03451 769 FunFam Uncharacterized protein 426 526 - -
Pste6g03451 769 FunFam Uncharacterized protein 527 731 - -
Pste6g03451 769 ProSiteProfiles Protein kinase domain profile. 451 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03451 769 SUPERFAMILY (Trans)glycosidases 33 361 IPR017853 -
Pste6g03451 769 Gene3D Glycosidases 45 361 - -
Pste6g03451 769 Pfam Glycosyl hydrolases family 18 35 360 IPR001223 GO:0005975
Pste6g03451 769 CDD STKc_IRAK 457 724 - -
Pste6g03451 769 Gene3D Phosphorylase Kinase; domain 1 421 526 - -
Pste6g03451 769 SMART 2g34 30 360 IPR011583 GO:0008061
Pste6g03451 769 Pfam Protein kinase domain 452 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03451 769 SMART serkin_6 451 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03451 769 ProSitePatterns Serine/Threonine protein kinases active-site signature. 572 584 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03451 Pste-Chr6 23262298 23266936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03451 437 769 Receptor kinase-like Gene Family AT4G11530 53.079 1.41e-117 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste6g03451 Glyco_hydro_18 5.2e-52 CL0058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03451 6 23262298 23266936 Pste6g03451 6 23262298 23266936 ECH