Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03445 atggtcgtgggagaccattttccagtgggcatgcgtgtacttgccgttgacgacgaccaaacatgtctcacagtgttggagactctgcttcgcaaatgccagtataatgttactacaactactcaatcaatagaggcgctagaaatattgaggaaaaacagaaataagtttgaccttgttatcagtgatgtgaatatgccagacatggatgggtttaagctgcttgagcaagtgggacttgaaacggacctacctgttatcatgttgtcaggatacggtgataaagagcgagtgatgagaggggtcatacatggcgcttgtgactatttaatgaaaccagttcgaattgaagagttacagaacatatggcaacatgtagtgcgaaggaagattgacagcaaggataagaataagacaagtgagggaaacggttgcagtatagcaggtaagcttgcaaatcaggagaaagcctgcaatatggatgcggaatgtaatcatgccattacatcaagaaataatgctgaccagaataaatacctgggtcaaaaaaggaaggaacaaagtgatgctgaagaagaggaagaagacgatcaagagagtgaggaaccctcaaataataagaagcctcgtttagtttgggatgccgagttgcatagcaaattccttgctgccatcaatcaactaggaattgacaaggctttccccaagaaaatacttgacttgatgaatgttgaaggacttacaagagaaaatgtagcaagccacctgcagaaatacagactcggtctcaaaaagcctactcaactacatagcatggttgctgcactaggtaacagtgatccttaccagcagatggattcaattgaaggttgttacatttcgtcaggatcagggggaatgttaagcccagccctaccatcatatgcatctggtggaatgttttgtaggttgaactccccatcaggcttaaacatgagaggaattaactcctctgcacatgttcggcctgttcagtctcaaaacattaatagcagttccataaaaacacttggaaacatgcaactgtccatgttttctgcaaatcaaacctcaagtttattacagggcattccagcagcaaacgatgcaaaccagtttcagcagaataactgtccaattggtattaggaagctgagtccactgcatgattcaagtggacttaaaatttcctctggtttctcagatagtagaactattcttaaaaatgcaaacaactctctaaatggactctcaaataatcatttacttctgcaaggaaattccacaccaacacataattcaggagcattcagaaatcacccttctcttgaagctgcttcggtgaacacacaatcttttgacccgggcatctgcaattcctctaatatgttagattataatcggcataataaaagctggcagggaacatctcagatatcaaaattccctgcctatacttttgcagtcagtaaggttatcaataatgatcaactggctcaaaataacttgaattttttgtcatccactttttgcagtgggaatagtccagttgatttttcttccactagtgctattgttgttcccttggaggatgccaaaggtaagctgcaacgtcaagaaggcttacttgagaatatcttactggcttcatcttacacccagcatccaagctgggaagaagataagggaggttgcaacaaagacataagtcaaaccttcaattccataaattctgtcatttctctaaatggagacactaattccttggagcatagtatagatcaaaataatacagtttgcggtaagagaatcgatgcatctttggttggccaaatgaatggggttaatccatcatttacacggtccagtgaaggtgaaaaattctattcaatgaagtcaaacgatgccagcattttgcagaacatgaagtctcatgaggtcctcatgcagaatagtttcaggtccttggatgatataatgagtgaaatagtcaaacaggagcaagatgcgattatgttgatggatggagaaatggagtttaatgcttaccgtgttggatcatgcaattga 2088 0.0 MVVGDHFPVGMRVLAVDDDQTCLTVLETLLRKCQYNVTTTTQSIEALEILRKNRNKFDLVISDVNMPDMDGFKLLEQVGLETDLPVIMLSGYGDKERVMRGVIHGACDYLMKPVRIEELQNIWQHVVRRKIDSKDKNKTSEGNGCSIAGKLANQEKACNMDAECNHAITSRNNADQNKYLGQKRKEQSDAEEEEEDDQESEEPSNNKKPRLVWDAELHSKFLAAINQLGIDKAFPKKILDLMNVEGLTRENVASHLQKYRLGLKKPTQLHSMVAALGNSDPYQQMDSIEGCYISSGSGGMLSPALPSYASGGMFCRLNSPSGLNMRGINSSAHVRPVQSQNINSSSIKTLGNMQLSMFSANQTSSLLQGIPAANDANQFQQNNCPIGIRKLSPLHDSSGLKISSGFSDSRTILKNANNSLNGLSNNHLLLQGNSTPTHNSGAFRNHPSLEAASVNTQSFDPGICNSSNMLDYNRHNKSWQGTSQISKFPAYTFAVSKVINNDQLAQNNLNFLSSTFCSGNSPVDFSSTSAIVVPLEDAKGKLQRQEGLLENILLASSYTQHPSWEEDKGGCNKDISQTFNSINSVISLNGDTNSLEHSIDQNNTVCGKRIDASLVGQMNGVNPSFTRSSEGEKFYSMKSNDASILQNMKSHEVLMQNSFRSLDDIMSEIVKQEQDAIMLMDGEMEFNAYRVGSCN 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03445 695 PIRSF RR_ARR_type-B 2 694 IPR017053 GO:0003677|GO:0003700|GO:0009736
Pste6g03445 695 Gene3D - 204 265 - -
Pste6g03445 695 Pfam Myb-like DNA-binding domain 212 260 IPR001005 -
Pste6g03445 695 SUPERFAMILY Homeodomain-like 207 265 IPR009057 -
Pste6g03445 695 FunFam Two-component response regulator 204 266 - -
Pste6g03445 695 SMART REC_2 11 123 IPR001789 GO:0000160
Pste6g03445 695 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 205 264 IPR017930 -
Pste6g03445 695 ProSiteProfiles Response regulatory domain profile. 12 127 IPR001789 GO:0000160
Pste6g03445 695 NCBIfam myb-like DNA-binding domain, SHAQKYF class 208 261 IPR006447 GO:0003677
Pste6g03445 695 MobiDBLite consensus disorder prediction 175 211 - -
Pste6g03445 695 CDD REC_typeB_ARR-like 13 127 - -
Pste6g03445 695 Gene3D - 10 143 - -
Pste6g03445 695 Pfam Response regulator receiver domain 13 121 IPR001789 GO:0000160
Pste6g03445 695 SUPERFAMILY CheY-like 10 131 IPR011006 -
Pste6g03445 695 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 338 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03445 Pste-Chr6 23188467 23192786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03445 5 383 Response Regulator Gene Family AT2G25180 50.130 6.95e-111 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Pste6g03445 Response_reg 3.2e-24 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03445 6 23188467 23192786 Pste6g03445 6 23188467 23192786 ECH