Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03440 atgactattagaagacccccattacctcgtctcttccttaataatgtctcttgcatgagaaatgcccaacaagttctgcgtcatgtgaatgtctctcttcatgatggaggggcacttgtgctaacaggcaccaatggctcaggaaagtcaactttcctgcgcatgttagctgggttttctcgtccctctgctggtgaaatcctttggaatggccatgacattcaacaatctgcaatattccatcagtataagcttcagcttaactggctctctctcaaggatgccattgatgataagatgacggttcttaacaatgtaaaatggtttgaatttcttgaacataaggaaggaaaggctatggctgcacttgagttgatgggactaggaaggttagccaatgaaaaaccaaggatgctatctatgggccagcggaaaagactgcaacttgccagattgctggcaattgatcgccccatatggttgctagatgagccttcagttgcactagatgatgatggtgtaaagctacttgagtatattattgcggagcataggaaatacggaggaattgtgattgtggcaacacatctacccattgagatgaaagattccatgatattaaggcttccaccaaggtttccaaggaggatgacccatgtggatatgcttgaccgggcagatatcacttaa 690 0.0 MTIRRPPLPRLFLNNVSCMRNAQQVLRHVNVSLHDGGALVLTGTNGSGKSTFLRMLAGFSRPSAGEILWNGHDIQQSAIFHQYKLQLNWLSLKDAIDDKMTVLNNVKWFEFLEHKEGKAMAALELMGLGRLANEKPRMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYIIAEHRKYGGIVIVATHLPIEMKDSMILRLPPRFPRRMTHVDMLDRADIT 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03440 229 NCBIfam heme ABC exporter ATP-binding protein CcmA 13 209 IPR005895 GO:0017004|GO:0022857
Pste6g03440 229 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 228 IPR003439 GO:0005524
Pste6g03440 229 Gene3D - 9 209 IPR027417 -
Pste6g03440 229 Pfam ABC transporter 26 166 IPR003439 GO:0005524
Pste6g03440 229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 198 IPR027417 -
Pste6g03440 229 SMART AAA_5 35 223 IPR003593 GO:0016887
Pste6g03440 229 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 6 223 IPR005895 GO:0017004|GO:0022857
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03440 24 178 Calmodulin-binding Proteins AT2G36910 26.437 1.99e-10 58.5