Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03423 atggctatgctccgcaaattgttcttccgcaagcctcctgatggcctcctcgagatctgcgagagggtttacgtttttgattgctgtttcaccactgatgcttggaatgaagagacttacaaggtgtacatggatgggatagttggtcaacttagggagaacttgcctgatgcttcgattctgattttcaattttcgtgaggagtataccaagagtcagatggcaaatatcatgtctgagtatgacattaccatcatggactatcctcggcattacgagggttgtcccgtgctcaaaatggagctcatccaccactttttgaggtctagcgaaagctggctctcgcttgggcagcacaatgtgttgttgatgcattgtgaacgtggcggttggcccgttttggctttcatgttggctgcattgttgatttatagaaaggtttataccggggagcagaagactttggatatggtttacaggcaggctccacatgagcttttgcatttgttgtcgccgttgaatcctatcccttcccaactgaggtatcttctgtatgtttccaggcggaatgtggctttagattggcctcccctggacagggcactcatgttggactgcatcattctcagattattcccaaactttgatggggaaggtggttgtcaccccgtgtttagaatttatggacaggatccctttagtgctgctaaacatccaaaaatgttgtactcgacgccaaagagaagcaaaaatgtccggacctataagcagggagagtgtgaacttattaaagtcgatattaattgccatattcaaggtgatgttgtcattgagagcattaacttgaatggtgacatggagcgtgaaaagatgatgttccgagttatgttcaacacagcttttgttagatctaatattttgatgcttgaccgtgatgaaattgacattttatgggatgctaaagatcattttccaaaagattttagagccgagatccttttctcagagatggatgctgcagcagcaattatagcggatggtacctcatgctttgaggagaaagaaggactgccaatggaagcatttgccaaggttcaagagatctttagtcatgtagactggatgaaccctaaggctgatgctgcactaaatgtgctccaacagataagtgcttcagctatgaatgacaggtcaggtacagtttctgctccgcacgtggaaaatggcactctattgcatgaaacaagtcctataacacctcaggggaatttgaatgaagtaagacagtcttcattctcaactaagagatccccagataatgacatgagtagaaaagaggataagaccaacaaggtcaagggtattccacaaaagcctggtacatctaacaccgaacatcaagacacagccagatcttctgaaacaaccttggaatccaataaatgtccaaccgaatctacaaatcatgacataaaactacaggcacctcatcatgccttatcttgttctgttgatacttctttttcccctcgaacacctccttcacggcctcaatccactagtgctaaagaaattcatgattctccttgccgaacagaatcgcctccttctcatattttgccttcacaatcaaaacaccaaccacaagacagaaatcattcatctatttcaattcctccacccgggacccaattttcatctacttttcatagtaagtcaccagctgacaccatttcccattcttcagcttcaacaattacttcaactcagccatctccttcactttcttccaaagatgtgaatgagattcctcctattagaacaagattagagtctttccctttgcgacctccaactccaccacctcctcctacacctccatcaaaggatcatagattagttcaagctagacctcctccttcaaagaataagctacatgttaaagagggagccccttcttctcctctatctcctatgaatgtagagccatgcattagagatggatcctctcctccccctccccctcctctacaagaggagcaacctattaggtttaaacctcctccacctccaccgcctccttgtctctttgggaaagttgaaggttctactatagcaccaccactttcctcagatcacactaatctttcattacaaaaatctccacctccacctccaccacctccgccccctcctgcagctccagctcctcctgcagcaccagctcctccacctcctccaccgcctccaggagcacctcctcctcctcctcctcctggagcacctgctgctccaccgcctccaattcccttcggtaaaggtggtctaaaacctggcagtcaatttccatcgtctctttctgcaggtacaacagggcctcaatctagttcaccagctggttcaaagggacggattttatcacgtacaattacctcaaaacataacaccaaaaaattgaagccattgcattggttgaaactatctagggcagtgcaaggaagtttgtgggctgagacacaaaaatttggtgaagattccaaggccccagagattgatatgtcagagcttgagaggctcttctcagcagcagtcccaaattcaggtgctgccaaaaagtcaaatgtccaaagctcagctggccctaaatctgataaagtgcaattgattgagcataggcgagcatataattgtgaaatcatgctttcaaaagtgaaagtgccattgcatgatttaatgagctcagtgctagcactggaagagtcagcactagacactgatcaggttgaaaacctcataaagtttagtcctacgaaagaggagatggaattgctcaagggttacactggggaaaaggagaagttaggaagatgtgaacagttcttaatggaattgatgaaagtaccacgggtggaatccaagctcagagttttttcgttcaagattcaattcaactctcagatcaagaattcattcaaattaaagagaataatgcaaacaatactttctttaggaaatgctttgaaccaaggaactgccaggggttctgctattggattcagattggatagccttcttaaactcaccgagacacgtgcacgggacaggaaaatgactctcatgcattatctttgtaaggtgctagaagacaaactaccggaagttttagacttctccaaggatcttgctaacctagagccagcagcaaagatccaattgaagtttctggctgaggagatgcaggctataaacaaaggattagaaaaggtggaacaggaactatcaagctctgaaaatgatgggcctatatcagaaactttccgcaagagggagagagaaaaagtccccaatagggatcctaacaagaaaaaggacaaacagaataagcatcctgaacaggcagcagtggtgaaggttgaaacagaaaagaaattgaaagtattcctcggttctgctgaagctgatgtccgttcattggctttactatattctgtcgtgggtaggaacgtagatacattgattctctattttggtgaagatccatctcgttgcccatttgagcaagttgtgtcgactttactcaactttactaggatgttcaacaaagcccatgaagaaaactgcaagcagcacgagcttgaaattaagaaaacaacagaaaccgagaaaaagaaatgtgaatcagaaagaattttacctacagctatccggacaggcaatgtcaaatag 3726 0.0 MAMLRKLFFRKPPDGLLEICERVYVFDCCFTTDAWNEETYKVYMDGIVGQLRENLPDASILIFNFREEYTKSQMANIMSEYDITIMDYPRHYEGCPVLKMELIHHFLRSSESWLSLGQHNVLLMHCERGGWPVLAFMLAALLIYRKVYTGEQKTLDMVYRQAPHELLHLLSPLNPIPSQLRYLLYVSRRNVALDWPPLDRALMLDCIILRLFPNFDGEGGCHPVFRIYGQDPFSAAKHPKMLYSTPKRSKNVRTYKQGECELIKVDINCHIQGDVVIESINLNGDMEREKMMFRVMFNTAFVRSNILMLDRDEIDILWDAKDHFPKDFRAEILFSEMDAAAAIIADGTSCFEEKEGLPMEAFAKVQEIFSHVDWMNPKADAALNVLQQISASAMNDRSGTVSAPHVENGTLLHETSPITPQGNLNEVRQSSFSTKRSPDNDMSRKEDKTNKVKGIPQKPGTSNTEHQDTARSSETTLESNKCPTESTNHDIKLQAPHHALSCSVDTSFSPRTPPSRPQSTSAKEIHDSPCRTESPPSHILPSQSKHQPQDRNHSSISIPPPGTQFSSTFHSKSPADTISHSSASTITSTQPSPSLSSKDVNEIPPIRTRLESFPLRPPTPPPPPTPPSKDHRLVQARPPPSKNKLHVKEGAPSSPLSPMNVEPCIRDGSSPPPPPPLQEEQPIRFKPPPPPPPPCLFGKVEGSTIAPPLSSDHTNLSLQKSPPPPPPPPPPPAAPAPPAAPAPPPPPPPPGAPPPPPPPGAPAAPPPPIPFGKGGLKPGSQFPSSLSAGTTGPQSSSPAGSKGRILSRTITSKHNTKKLKPLHWLKLSRAVQGSLWAETQKFGEDSKAPEIDMSELERLFSAAVPNSGAAKKSNVQSSAGPKSDKVQLIEHRRAYNCEIMLSKVKVPLHDLMSSVLALEESALDTDQVENLIKFSPTKEEMELLKGYTGEKEKLGRCEQFLMELMKVPRVESKLRVFSFKIQFNSQIKNSFKLKRIMQTILSLGNALNQGTARGSAIGFRLDSLLKLTETRARDRKMTLMHYLCKVLEDKLPEVLDFSKDLANLEPAAKIQLKFLAEEMQAINKGLEKVEQELSSSENDGPISETFRKREREKVPNRDPNKKKDKQNKHPEQAAVVKVETEKKLKVFLGSAEADVRSLALLYSVVGRNVDTLILYFGEDPSRCPFEQVVSTLLNFTRMFNKAHEENCKQHELEIKKTTETEKKKCESERILPTAIRTGNVK 1241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03423 1241 MobiDBLite consensus disorder prediction 412 488 - -
Pste6g03423 1241 Gene3D Formin, FH2 domain 808 1211 IPR042201 -
Pste6g03423 1241 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Pste6g03423 1241 MobiDBLite consensus disorder prediction 719 773 - -
Pste6g03423 1241 MobiDBLite consensus disorder prediction 502 525 - -
Pste6g03423 1241 MobiDBLite consensus disorder prediction 780 810 - -
Pste6g03423 1241 PANTHER FORMIN-J 1 694 - -
Pste6g03423 1241 MobiDBLite consensus disorder prediction 535 601 - -
Pste6g03423 1241 ProSiteProfiles C2 tensin-type domain profile. 199 337 IPR014020 -
Pste6g03423 1241 Gene3D - 196 340 - -
Pste6g03423 1241 Coils Coil 1072 1099 - -
Pste6g03423 1241 MobiDBLite consensus disorder prediction 1102 1133 - -
Pste6g03423 1241 SMART PTEN_C2_2 197 336 IPR014020 -
Pste6g03423 1241 MobiDBLite consensus disorder prediction 614 629 - -
Pste6g03423 1241 MobiDBLite consensus disorder prediction 667 697 - -
Pste6g03423 1241 SUPERFAMILY Formin homology 2 domain (FH2 domain) 822 1216 - -
Pste6g03423 1241 MobiDBLite consensus disorder prediction 1092 1133 - -
Pste6g03423 1241 MobiDBLite consensus disorder prediction 438 453 - -
Pste6g03423 1241 MobiDBLite consensus disorder prediction 455 488 - -
Pste6g03423 1241 PRINTS Proline rich extensin signature 676 692 - -
Pste6g03423 1241 PRINTS Proline rich extensin signature 720 745 - -
Pste6g03423 1241 PRINTS Proline rich extensin signature 651 672 - -
Pste6g03423 1241 PRINTS Proline rich extensin signature 615 627 - -
Pste6g03423 1241 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Pste6g03423 1241 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 202 337 IPR035892 -
Pste6g03423 1241 SMART it6_source 615 1241 IPR015425 -
Pste6g03423 1241 Pfam Formin Homology 2 Domain 814 1117 IPR015425 -
Pste6g03423 1241 Gene3D Protein tyrosine phosphatase superfamily 14 191 IPR029021 -
Pste6g03423 1241 Coils Coil 1200 1220 - -
Pste6g03423 1241 ProSiteProfiles Formin homology-2 (FH2) domain profile. 809 1225 IPR015425 -
Pste6g03423 1241 MobiDBLite consensus disorder prediction 502 814 - -
Pste6g03423 1241 MobiDBLite consensus disorder prediction 412 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03423 Pste-Chr6 22903505 22915167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03423 1 407 Protein tyrosine phosphatase (PTP) family AT5G58160 65.281 0.0 603