Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03402 atggttttactatgggcattttgggtcatgctattattttgctgctgctgctgctctgaagccaaagaatacgttgttggtggcactcagcattcttggaaggctcctctctcctcaccaaattctctcaaccactgggcccaaactcaccgtttcaaaataggcgatactcttgtatttaaatacgatgagagaacagaatcagtgcacgaagtgaatgagagggactacgaaatgtgcaacatcgtgggaaaagatcatgtggtcttcaacgatggcaacacaaaagtctcccttaccaaatctggattcagacacttcattagtggaattcagagccattgccagaccggcctaaagctaactgtagttgtcatgtctcacaaaaccaaatacaaacttcactctccctctccttctccgtcaccctcgccctcgccgtcaccgtcaccgtcaccctcgccctccccgtcaccgtcacattcaccggttccaaataatcaaggttttactcctacttctggcgctggattcgtccgacttgtgatgtggctcatcatgttattggcttaa 573 0.0 MVLLWAFWVMLLFCCCCCSEAKEYVVGGTQHSWKAPLSSPNSLNHWAQTHRFKIGDTLVFKYDERTESVHEVNERDYEMCNIVGKDHVVFNDGNTKVSLTKSGFRHFISGIQSHCQTGLKLTVVVMSHKTKYKLHSPSPSPSPSPSPSPSPSPSPSPSPSHSPVPNNQGFTPTSGAGFVRLVMWLIMLLA 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03402 190 FunFam Early nodulin-like protein 1 21 130 - -
Pste6g03402 190 SUPERFAMILY Cupredoxins 21 126 IPR008972 -
Pste6g03402 190 Pfam Plastocyanin-like domain 33 118 IPR003245 GO:0009055
Pste6g03402 190 Gene3D - 19 128 IPR008972 -
Pste6g03402 190 ProSiteProfiles Phytocyanin domain profile. 22 127 IPR003245 GO:0009055
Pste6g03402 190 PANTHER BLUE COPPER PROTEIN 23 137 IPR039391 GO:0009055
Pste6g03402 190 MobiDBLite consensus disorder prediction 132 171 - -
Pste6g03402 190 MobiDBLite consensus disorder prediction 138 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03402 Pste-Chr6 22700768 22703449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03402 9 145 Phytocyanin Superfamily AT4G30590 43.885 2.27e-32 113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03402 6 22700768 22703449 Pste6g03402 6 22700768 22703449 ECH