Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03399 atgatggcattccaaagcaaggtccatatcttcttcctgtgcttattaatctttgaagtttcatccattcttgttgttgctgtttcaaaagagcaagaccaagatcgaatctcagcactccccggccagccacgtgtggcattctcacagttctctggttatgtcactgtgaacgaacaacatggtcgagcactcttctactggctcactgaatcccccatttccccacagaataagcctcttgttctctggctcaatggaggaccgggatgctcatcggtagcatacggggcatcagaggaaattgggccattcctgataaacaaaactggatcttctctatatctcaacaaatatgcatggaacagagaagcaaatattctgtttcttgaatcacctgctggtgttggcttctcgtacacaaataccagctctgatctcaaaacttcaggggacaaaagaacagctcaggatgcactaatttttctaattagatggatgtcaaggtttccacaatataaatacagggagttttacattgccggggagagctatgcagggcattacgtaccccagttggctaacaaaatccatgattataataaaaataattccccacttattaatctcaaagggttcattgtgggaaatgctgtgactgatagctacaacgatgggattggaactgtcacgtattggtggagccattctatgatatctgaccgttcatacaaatctatcctcaaatactgcaatttcacagcagaagaaacatctaaaaaatgtgatgatgtttatagttatgcggttaactatgaatttggaaatatagaccagtatagcatctacacccctacctgcccagcatcacaaaacaacagtgtcaagcacaaacgattcaagaatcttcatctgatttcaggatatgatccttgtactgaaaattatgcagagaaatactataaccttcgtgaagtgcagaaagcaatgcatgcaaatgttaccaacattccttacaaatggactgcttgcagtgatgtgctcctaaaaaattggaaggattctgaaatttctgtgttgcccatatacaaagagttaattgccgcgggtttgagaatatgggttttcagcggggacacagattccgtagttccagtgactgccacaaggttttctctgaaccaccttaacctgagcatcagaactcgttggtatccatggtactctggtgaccaggttggtggatggacagaggtgtataatggactaacatttgcaacagtaagaggagctggccatgaagtacctttgtttcagccaaagcgggcttacattcttttcaactcttttttggcaggaaaggagctaccaaaatattcacaacattaa 1389 0.0 MMAFQSKVHIFFLCLLIFEVSSILVVAVSKEQDQDRISALPGQPRVAFSQFSGYVTVNEQHGRALFYWLTESPISPQNKPLVLWLNGGPGCSSVAYGASEEIGPFLINKTGSSLYLNKYAWNREANILFLESPAGVGFSYTNTSSDLKTSGDKRTAQDALIFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLANKIHDYNKNNSPLINLKGFIVGNAVTDSYNDGIGTVTYWWSHSMISDRSYKSILKYCNFTAEETSKKCDDVYSYAVNYEFGNIDQYSIYTPTCPASQNNSVKHKRFKNLHLISGYDPCTENYAEKYYNLREVQKAMHANVTNIPYKWTACSDVLLKNWKDSEISVLPIYKELIAAGLRIWVFSGDTDSVVPVTATRFSLNHLNLSIRTRWYPWYSGDQVGGWTEVYNGLTFATVRGAGHEVPLFQPKRAYILFNSFLAGKELPKYSQH 462
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03399 462 Gene3D - 359 453 - -
Pste6g03399 462 SUPERFAMILY alpha/beta-Hydrolases 27 458 IPR029058 -
Pste6g03399 462 Pfam Serine carboxypeptidase 42 452 IPR001563 GO:0004185|GO:0006508
Pste6g03399 462 Gene3D alpha/beta hydrolase 31 289 IPR029058 -
Pste6g03399 462 ProSitePatterns Serine carboxypeptidases, histidine active site. 423 440 IPR033124 GO:0004185
Pste6g03399 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Pste6g03399 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Pste6g03399 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 423 436 IPR001563 GO:0004185|GO:0006508
Pste6g03399 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Pste6g03399 462 FunFam Carboxypeptidase 359 453 - -
Pste6g03399 462 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 37 440 IPR001563 GO:0004185|GO:0006508
Pste6g03399 462 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Pste6g03399 462 FunFam Carboxypeptidase 31 289 - -
Pste6g03399 462 Gene3D - 312 349 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste6g03399 Pste-Chr6 22676658 22683893 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03399 317 456 Calmodulin-binding Proteins AT2G22960 31.206 8.99e-16 73.6
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03399 6 22676658 22683893 Pste6g03399 6 22676658 22683893 ECH