Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03381 atggaagccagcgctggactggtcgctggttctcacaatcgcaacgagctcgttgttattcatggccatgaagagtacaagcctttgaagaacttggatggccaagtgtgtgagatatgtggcgatgatgtgggactcacggtggatggagacttgtttgtggcctgcaatgagtgtggttttccggcatgtcgaccatgctatgagtatgaaagaagagaagggagacaagtttgtccacaatgcaagaccagatacaagcgtctcaaagggagtcctcgtgttgagggagatgatgatgaggaagatgtggatgatattgaacatgaattcaacatggatgaacaaatgaacaagcataaccattctgccgaggccatgctgcatgggaagatgagctacggaagaggtcttgatgatgatgagaatactcaatttccagctgttattgctggtggtcgttctcggcctgttagtggagagttcccaataaagtctcattatggggaccagatagcttctacactgcataatcgagtgcacccatatccagcgtctggtcctagaaatggaaatgaaaccagagaagatagaatggacgactggaagtttcaacaaggaaatttggggcctgaacctgatgaggatccagatacagccatgttagatgaagcaaggcaaccactatcaaggaaggtgccaatagcctccagcaaagttaatccatataggatggtgatagtggcacgccttgtaatccttgccttcttcctccgatatagacttatgaatcctgtacatgatgcattggggttgtggctaacttctattatatgtgaaatctggtttgctttttcatggatccttgatcagtttcccaaatggtttcccattgatcgagagacctaccttgatcgtctttcgatcaggtatgagcgcgaaggtgaacccaacatgcttgctccagtggatgtctttgtcagtaccgtggatcccatgaaggaacctcctttggttacagccaacactgttctttcaatcttggccatggattacccagttgataagatatcatgttacatttctgatgacggagcttctatgtgtacatttgaagctctgtcagaaactgcagagtttgctaggaagtgggtaccgttctgcaagaaatttactatagaacctagagcaccagagatgtacttctgtgagaaaattgactacctcaaggacaaggtgcagcctacctttgttaaggagcgtcgagctatgaagagagaatatgaagagtttaaggttaggatcaatgcactcgtggcaaaagctcagaaggttccccaaggaggatggattatgcaggatgggacaccatggccaggaaacaatactaaggatcatcctggtatgattcaagtctttctcggtcacagtggaggacatgatactgaaggaaacgagcttccacgtcttgtttatgtttctcgagagaaaaggcctggattccaacaccacaagaaagctggtgctatgaatgctttgattcgggtgtctgctgtgctcacaaacgctcctttcatgctgaacttggattgtgatcattatgtcaataacagcaaggctgctcgagaggccatgtgcttcttaatggacccccaaactgggaagaagatctgctatgtccagtttcctcaaagatttgatggcattgataggcatgatcgttatgccaataggaacacagttttctttgatattaacatgaagggtctagatggtattcaaggtcctgcatatgttggcacagggtgcgtatttaggagacaagctttatatggctataatcctcccaaggatccaaagcgtccaaaaatgataagctgtgattgctgcccatgttttggaaagcgcaagaaggttaagtacgaagggaaagatgcaaatggagaggcagcaagcctaagaggaatcgatgatgacaaagaggtgctgatgtcccagattaattttgagaagaaatttgggcagtcatctatttttgtgacttcaaccttaatggaagagggtggtgtgcctccttcctcaagtccagcaagccagcttaaagaagccattcatgtaatcagctgtggatatgaagacaaaactgaatggggcattgagcttggttggatttatgggtctattacagaggatattctaacaggatttaagatgcattgccgtggttggagatccatttattgcatgccaaagagacctgcattcaagggtacagctcctatcaatttgtcagataggcttaatcaggtgcttcgctgggcccttggctccattgagattttcttcagtcgccattgccctttatggtatggctataaggaagggaagctgaagtggcttgagcgatttgcctatgctaacacaactgtctaccccttcacttccatacctctagttgcctactgtattcttcctgctgtctgtttactcactgataaattcatcatgccaccgataagcacttttgctggtttgtacttcgttgctctattctcttcaatcattgcaactggccttcttgagttgaaatggagtggagtgagcattgaggaatggtggagaaacgagcaattctgggtcattggtggtgtgtcagctcacctctttgccgtcatacaaggtcttttgaaggttttggcaggaatagacaccaacttcaccgttacatccaaggcagccgatgatgaagagtttggtgaattatatgcctttaagtggactactctcctgattcctccaaccactatcttaataataaacattgttggggttgttgctggaatatcagatgccataaacaatgggtaccaatcttggggacctctatttggaaaactattcttttcattttgggtgattgttcatctctatccattccttaaaggtttgatgggtcgccaaaaccgcacacccaccatagtcgttatatggtcagttctattggcttctattttctccttactttgggtaagaattgacccatttgtattaaaaaccaagggacctgataccaagctatgcggaatcaactgttga 3096 0.0 MEASAGLVAGSHNRNELVVIHGHEEYKPLKNLDGQVCEICGDDVGLTVDGDLFVACNECGFPACRPCYEYERREGRQVCPQCKTRYKRLKGSPRVEGDDDEEDVDDIEHEFNMDEQMNKHNHSAEAMLHGKMSYGRGLDDDENTQFPAVIAGGRSRPVSGEFPIKSHYGDQIASTLHNRVHPYPASGPRNGNETREDRMDDWKFQQGNLGPEPDEDPDTAMLDEARQPLSRKVPIASSKVNPYRMVIVARLVILAFFLRYRLMNPVHDALGLWLTSIICEIWFAFSWILDQFPKWFPIDRETYLDRLSIRYEREGEPNMLAPVDVFVSTVDPMKEPPLVTANTVLSILAMDYPVDKISCYISDDGASMCTFEALSETAEFARKWVPFCKKFTIEPRAPEMYFCEKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKVPQGGWIMQDGTPWPGNNTKDHPGMIQVFLGHSGGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYVNNSKAAREAMCFLMDPQTGKKICYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPAYVGTGCVFRRQALYGYNPPKDPKRPKMISCDCCPCFGKRKKVKYEGKDANGEAASLRGIDDDKEVLMSQINFEKKFGQSSIFVTSTLMEEGGVPPSSSPASQLKEAIHVISCGYEDKTEWGIELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGTAPINLSDRLNQVLRWALGSIEIFFSRHCPLWYGYKEGKLKWLERFAYANTTVYPFTSIPLVAYCILPAVCLLTDKFIMPPISTFAGLYFVALFSSIIATGLLELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKAADDEEFGELYAFKWTTLLIPPTTILIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTKLCGINC 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03381 1031 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 468 614 IPR029044 -
Pste6g03381 1031 FunFam Cellulose synthase 19 110 - -
Pste6g03381 1031 ProSiteProfiles Zinc finger RING-type profile. 37 83 IPR001841 -
Pste6g03381 1031 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 110 IPR013083 -
Pste6g03381 1031 CDD mRING-HC-C4C4_CesA 35 85 - -
Pste6g03381 1031 SUPERFAMILY RING/U-box 21 109 - -
Pste6g03381 1031 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Pste6g03381 1031 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 226 998 - -
Pste6g03381 1031 Coils Coil 421 441 - -
Pste6g03381 1031 FunFam Cellulose synthase 440 614 - -
Pste6g03381 1031 SUPERFAMILY Nucleotide-diphospho-sugar transferases 336 803 IPR029044 -
Pste6g03381 1031 MobiDBLite consensus disorder prediction 175 196 - -
Pste6g03381 1031 Pfam Cellulose synthase 323 1025 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03381 Pste-Chr6 22533151 22538299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03381 1 1031 Cell Wall Biosynthesis AT5G17420 85.853 0.0 1832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03381 6 22533151 22538299 Pste6g03381 6 22533151 22538299 ECH