Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03314 atgctatcaagatcttgcttggggctattgaatttggtatcaatggatgattaccaagcgctgggtcgtgttccgcgggtggtgacgacgggaaacagagatgtggcggagttggagataaacggaatgcagaatttgggatcggaggaggtggtttcgacggtggcgcgagagagaaggatcgtggtagcgaatcagttaccgatacacgcgtttcgggaggggaagaaattgaggttggagtgggacaaagacagccttgtgtatcagctgaaagacgggttcccatcggacgtggaagtcttgtacgtgggatcgctgaaagtagagatcgaagcgtgggaacaagaagaagtggctcaaatacttctggaaaggttccgctgcgtcccaacgtttatgcccgcggagcttcacaacaaattctatcacggattctgcaagcattacctgtggcctctttttcactacatgctgcccatgtcgtcgagccaaggcgcgcgtttcgaccgcgaccagtggaaggcctatgtcctcgcgaacaggatcttcgccgacaagatcacggaggttatcaacccggacgaggattatgtctgggttcatgattaccatctcatgatactccccacttttctgcggaagcgcttccaccgcgtcaagctggccttcttcttacacaacacgtttccctcctccgagatataccgcaccttgcccgtccgcgaggacattctccgcgcctttttgaactgcgatttgatcggcttccacaccttcgactacgcccgccattttctctcctgttgcagcaggatgctgggtctcgattacgagtccaagaggggttacattggtttggattactacggtcgcaccgtcaccattaagatcctccccgccgggattcacatgggccgtttcgagtccttcttgtccttgccccacaccgcttcaaggatcaaggagttgaaggagcagtttaaggggaagtttgtcatattaggtgtggatgacatggacttgtttaaaggtattagtttgaagttcttggcgttggggaagcttctcgaagttgaccaaggtttgcggggtcgtgtggtcttgcttcagattctcaacgctgccaggagtagaggcaaagacattcaggacgtccagatcgagagcgaggctattgccagggatattaatgacaaatattccctaccgggttaccagcctatttttatcatcaatggccccatctccatgcacgaaaaggctgcctattacgctctttcagactgctgcgttgtcaatgctgtgagggatggcatgaatttggtgccttatgagtacactgtttgtaggcagggaagtcttgctttggacaaggcgcttggacttgaacctgctggagctggacataaacacagcgttattgttgtgtctgagtttattggctgttccccttctctcagtggggccatcagggtcaatccctggaacattgatcaagttgctgaggctatgaattcggctgtcacaatgtccgagtccgagaagattttgcgccatgagaagcattacaagtacataagctctcatgatgtcgccttctgggccaggagttttgatcttgattttgatagagcttgtagagagcattactcaaagaggtattggggtgttggcttcggcttcagcttcagaatcgttgctttggatcctacctttaggaagctttctgtggatcacattgcctctgcgtacagagatacacacagtcggttgatccttttggattacgatggcaccatgatgcctcaggcatcaatagacaagactccaagcagggaagttatttctgtcttgaattatttatgcagtgatccccaaaatgtggtgttcattgtgagcggcagggacaaggattgcttggccaagtggttttctccttgtcagaaattgggactctctgctgagcacggttacttcagcaggtggagtaaggattccccttgggaaacttgcggattgaccgccgattttgattggaaactgattgcagaacctgtgatggcgctttatacagaagcaactgatggttccttcattgaacataaggaaagcgcaatggtttggcatcatcaagaagcagatccttattttggatcatgccaagcaaaagagcttcttgatcaccttgagagtgtgcttgccaatgagccagtagtggttataaggggacaacatatagttgaagttaaacctcagggtgtgagcaaggggaaagtggtggaagaccttatctcaatcatgagaagcaagggaaagtcaccagattttctactgtgcataggagatgatcgctcagatgaagatatgtttgaatgcattgctcgttcagtatctaatccagcccttccaaccatatcaagagtgtttgcatgcactgtgggacagaaaccaagtatggctgaatactatttggatgatactagcgaagtaatcaagttgcttgaaggacttgcaactacatcagcaccatctgcgaccataatttctcaggaattgcgaggaacagtatag 2574 0.0 MLSRSCLGLLNLVSMDDYQALGRVPRVVTTGNRDVAELEINGMQNLGSEEVVSTVARERRIVVANQLPIHAFREGKKLRLEWDKDSLVYQLKDGFPSDVEVLYVGSLKVEIEAWEQEEVAQILLERFRCVPTFMPAELHNKFYHGFCKHYLWPLFHYMLPMSSSQGARFDRDQWKAYVLANRIFADKITEVINPDEDYVWVHDYHLMILPTFLRKRFHRVKLAFFLHNTFPSSEIYRTLPVREDILRAFLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTIKILPAGIHMGRFESFLSLPHTASRIKELKEQFKGKFVILGVDDMDLFKGISLKFLALGKLLEVDQGLRGRVVLLQILNAARSRGKDIQDVQIESEAIARDINDKYSLPGYQPIFIINGPISMHEKAAYYALSDCCVVNAVRDGMNLVPYEYTVCRQGSLALDKALGLEPAGAGHKHSVIVVSEFIGCSPSLSGAIRVNPWNIDQVAEAMNSAVTMSESEKILRHEKHYKYISSHDVAFWARSFDLDFDRACREHYSKRYWGVGFGFSFRIVALDPTFRKLSVDHIASAYRDTHSRLILLDYDGTMMPQASIDKTPSREVISVLNYLCSDPQNVVFIVSGRDKDCLAKWFSPCQKLGLSAEHGYFSRWSKDSPWETCGLTADFDWKLIAEPVMALYTEATDGSFIEHKESAMVWHHQEADPYFGSCQAKELLDHLESVLANEPVVVIRGQHIVEVKPQGVSKGKVVEDLISIMRSKGKSPDFLLCIGDDRSDEDMFECIARSVSNPALPTISRVFACTVGQKPSMAEYYLDDTSEVIKLLEGLATTSAPSATIISQELRGTV 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03314 857 CDD HAD_TPP 592 833 - -
Pste6g03314 857 FunFam Alpha,alpha-trehalose-phosphate synthase 311 528 - -
Pste6g03314 857 Pfam Glycosyltransferase family 20 59 542 IPR001830 GO:0003824|GO:0005992
Pste6g03314 857 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 52 309 - -
Pste6g03314 857 Gene3D Glycogen Phosphorylase B; 52 309 - -
Pste6g03314 857 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 53 839 IPR001830 GO:0003824|GO:0005992
Pste6g03314 857 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 590 707 - -
Pste6g03314 857 Pfam Trehalose-phosphatase 594 829 IPR003337 GO:0003824|GO:0005992
Pste6g03314 857 SUPERFAMILY HAD-like 591 839 IPR036412 -
Pste6g03314 857 Gene3D Glycogen Phosphorylase B; 310 528 - -
Pste6g03314 857 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 720 851 - -
Pste6g03314 857 NCBIfam trehalose-phosphatase 590 839 IPR003337 GO:0003824|GO:0005992
Pste6g03314 857 CDD GT20_TPS 59 542 IPR001830 GO:0003824|GO:0005992
Pste6g03314 857 NCBIfam HAD-IIB family hydrolase 592 795 IPR006379 -
Pste6g03314 857 Gene3D - 720 849 IPR023214 -
Pste6g03314 857 Gene3D - 590 704 IPR023214 -
Pste6g03314 857 FunFam Trehalose-6-phosphate synthase 2 674 753 - -
Pste6g03314 857 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03314 Pste-Chr6 21646415 21650450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03314 10 845 Trehalose Biosynthesis Gene Families AT2G18700 66.271 0.0 1149