Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03290 atggattttacggtagctaagtgcttccctccctttatttggtggtttgtgattattttagttgtgctgctacaaacaccaacgggaagtgggtcgaagttggaagagatgaagttgagggtgggagtacccagaaaacatggtttccgccaatttgtgaacgtagtttgggaccctcgtcaacaaaaggacaacttttctggatattgcatggatgttttcaacgccgtcttaacccgtctacctttcaatgtttctctagatgttcaaccttatgacattgaatcaactgagatttctggaacctacgaagaacttctgaaactcatcccagaaaaggtaggggatgtaacaatccttgcctcccgttcggatttcgtagattttacactgccatatacgggatctggagttaaaatgttagtgccagttaaacatgggaggcaacagaccatgtggatttttgtgaaacccttcagctgggatctttggttgagcatactcatcatctctatgttcatagggcttaccatactattcatggaaagaaacgtaaatgcaaatgcgctccctgatcaggaagcttcaccaaatcgatcaaagctcagtcctgcaaccatcttatggtttccaatttcacaagccattctccctgaaagacaattagtggcgaagaactgctcgagatttgtgttgatggtttggcttctattggcgttcgtgctcatgcaaagttatactgcaaacttgacttctatattgacgttggatcagctgagaccaagttttctgaatgtaaatgatctaagaaaagggggttactatgttggatatcaaacggggtcgttcatttatgatcagttggttgagcattttaagtttgacccatcaaagctgagggcatacagcaacacttctgggtatcatcatgctttaaaaattggaagccaagctgggggcgttgcggctatattcgatgaacttccctaccttaaagtcctccttcaacaatacggatccaattacatcttgtccggacccagatatagaaatgctggctttggttttgcattctctaaaaattcgaatctaacggcttacttttcaaggggcatattgaaggtgactgaaagtgacttaatgaatgaaattgagggaaattattttgggaaggttggcgatgaagatggaaaagaggcgtctgtggagatgccttcgggtactccaagtctaacctttcatagctttgcaggactcttcttgatcacagggatttgtactgtgttagcattattgctctcagaaactgttatatggcaaaggcccatttcgatggctaaggcatacagtcagaggtggattaaaacttaa 1371 0.0 MDFTVAKCFPPFIWWFVIILVVLLQTPTGSGSKLEEMKLRVGVPRKHGFRQFVNVVWDPRQQKDNFSGYCMDVFNAVLTRLPFNVSLDVQPYDIESTEISGTYEELLKLIPEKVGDVTILASRSDFVDFTLPYTGSGVKMLVPVKHGRQQTMWIFVKPFSWDLWLSILIISMFIGLTILFMERNVNANALPDQEASPNRSKLSPATILWFPISQAILPERQLVAKNCSRFVLMVWLLLAFVLMQSYTANLTSILTLDQLRPSFLNVNDLRKGGYYVGYQTGSFIYDQLVEHFKFDPSKLRAYSNTSGYHHALKIGSQAGGVAAIFDELPYLKVLLQQYGSNYILSGPRYRNAGFGFAFSKNSNLTAYFSRGILKVTESDLMNEIEGNYFGKVGDEDGKEASVEMPSGTPSLTFHSFAGLFLITGICTVLALLLSETVIWQRPISMAKAYSQRWIKT 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03290 456 Pfam Bacterial extracellular solute-binding proteins, family 3 62 391 IPR001638 -
Pste6g03290 456 Gene3D - 152 293 - -
Pste6g03290 456 Pfam Ligand-gated ion channel 392 425 IPR001320 GO:0015276|GO:0016020
Pste6g03290 456 CDD GluR_Plant 38 389 - -
Pste6g03290 456 SUPERFAMILY Periplasmic binding protein-like II 14 391 - -
Pste6g03290 456 Gene3D - 31 151 - -
Pste6g03290 456 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 441 IPR015683 -
Pste6g03290 456 SMART GluR_14 38 391 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03290 Pste-Chr6 21364225 21367454 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03290 11 433 Ion Channels AT5G11210 35.897 8.56e-83 270