Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03288 atggctaagtgcttgtattggtttctgattattttgcttgtgctgcaacagacacaaaaggggaatgggtcaaatgcaactaaagtgatcaagttgagagtaggggtaccccataaaaatggtttccctcaatttgtgaatgtagtttggaactctcatgaaaaaaaataccacgtatctggatattgcatagacgttttcaatgccgttgtaaagctcttacctttcaacgtttctctagatattaaaccttatgttgtagaatcaaggcacagttctggagctggatcatacgattcacttctccaacaaatcccaacaaagtatgacgttgtggtaggggatataacaatcttggcgaaccgttcacatatcgtagatttcactctgccatatacagaatcgggatttaaaatgcttgtaacagttcagcataggaggcaacaaaccatatggatttttttgaaacccttcagctgggatctttggctgagcatagtcatcatctctatgttcataggggttgccatactcatcatggaaagaaatgtaaacgaacttcctgatcgaacaaaacttagtgctgcaaccatcttatggtttccattttcacaagccattctccctgaaagacaagtagtgtccaagaaatgctcgagatttgtgttgatggtttggcttctgttggcgttcctactcatgcaaagttataccgcaaacttgacttctatattgacgttggatcagctgagaccaagttttctgaacgtaaatgatctaagaaatggaggttactatgttggatatcaaacggggtcgttcatttacgatgttttggttgagcaatttaagtttgaccgatccaagctgaggaattatagcagcagttctgagtatcaacacgctttaaacattggaagccaacgtgggggtgtggcagctatattcgatgaactgccctaccttaaagtcttccttcaacaattcggatccaattatatcttggccggtccaagatatagaaacgatggctttggttttgcatttcctttaaactcaaatctgacatctcacttttcaagagccatcttgaacgtgactgagagtgatttaatgaataaaatagaggaaacatattttgggaagaatgatattggagaggaggcgtctgcgacaattccttccgctactctaagtctcaactttcatagctttgcagggctcttcttgattacaggggtttctactttattagtgttgttggtctctgaaactgttatatggcaaaggctcattttaaaggctaaagcacttcttccccactccacctcccacccaaacacgcctattcatccaactcatgattcaacacgtggaatagaggctgtttaa 1392 0.0 MAKCLYWFLIILLVLQQTQKGNGSNATKVIKLRVGVPHKNGFPQFVNVVWNSHEKKYHVSGYCIDVFNAVVKLLPFNVSLDIKPYVVESRHSSGAGSYDSLLQQIPTKYDVVVGDITILANRSHIVDFTLPYTESGFKMLVTVQHRRQQTIWIFLKPFSWDLWLSIVIISMFIGVAILIMERNVNELPDRTKLSAATILWFPFSQAILPERQVVSKKCSRFVLMVWLLLAFLLMQSYTANLTSILTLDQLRPSFLNVNDLRNGGYYVGYQTGSFIYDVLVEQFKFDRSKLRNYSSSSEYQHALNIGSQRGGVAAIFDELPYLKVFLQQFGSNYILAGPRYRNDGFGFAFPLNSNLTSHFSRAILNVTESDLMNKIEETYFGKNDIGEEASATIPSATLSLNFHSFAGLFLITGVSTLLVLLVSETVIWQRLILKAKALLPHSTSHPNTPIHPTHDSTRGIEAV 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03288 463 SMART GluR_14 31 382 IPR001320 GO:0015276|GO:0016020
Pste6g03288 463 MobiDBLite consensus disorder prediction 443 463 - -
Pste6g03288 463 Gene3D - 151 293 - -
Pste6g03288 463 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 27 430 IPR015683 -
Pste6g03288 463 Pfam Ligand-gated ion channel 383 414 IPR001320 GO:0015276|GO:0016020
Pste6g03288 463 CDD GluR_Plant 31 380 - -
Pste6g03288 463 Gene3D - 25 150 - -
Pste6g03288 463 Pfam Bacterial extracellular solute-binding proteins, family 3 58 382 IPR001638 -
Pste6g03288 463 FunFam Glutamate receptor 2.7 27 150 - -
Pste6g03288 463 SUPERFAMILY Periplasmic binding protein-like II 1 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03288 Pste-Chr6 21326845 21334390 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03288 27 445 Ion Channels AT5G11210 38.353 6.93e-92 295