Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03282 atggtacttccctcccctgccaaaatactagttggcctctccttagaccctgatgacagcaaggagattctctcatgggcaataagagttctagccaatccaaatgacaccattgtggctgtgcatgttcttgtagctgcggataagaagaagcgtgtctcggtcaggagaagtctatcacaacttagacaagcaaaagcatatgttatatctgtgctgggagaatttgcacagacctgttggtctaagcaggttaatttggaggccagggtggaattcaattccacagttggtgaaggtttagtggaggaagccaagtccatcaatgctgactttcttcttgttcgtggctcaagaaaccgaacaaataaaaatgcaacttctaaaggaattaccaagtattgttttgagcatgcacatgaagggtgtacaatgatctctgttgggagacgtataaaggcagatcaaaatactaattcacactcaacacgttttcaagataaaaaacaacctagttcaagatggtttaagaagaataagcaaagtgaaaacggtgcctcctctgttctggaggactatatctcgggaaacaaggcacggaaccgttcaccaagaacggtactagatggtctagagggacaatcgaacagcactgaagatgatacattcagcactagggtctcaagcaccacttataccccatcaacggattctaagagtaagagccgatccaagacaagaaaaccacacttcctattcaggttcatagtctcattccttgcttcaccatttggaaggaggaacttcaacatgtctgaaaatgataagcgtcagcctttgttgaagtgcttcagctatgaacagatatccaatgctaccaaagacttccaccaagataatttggttggacgaggtgggtactcggaagtgtacaaaggtgatctttcggatggacgaacaattgctgtgaagaggttggccaaggacaacagggatcctaacaaggaaaaagagttccttatggaattgggtgtaattggacatgtctgtcatcctaatactgcaacattagtgggctgctgcattgaaaatggactatatctgattttcaattactctcaaaatggaaatttagcaactgcattgcatggtaaaggaggagattcattagactggccaatcagatacaaaattgccataggtgttgcaaggggtctccattatcttcatacatgttgcaaacaccgaataattcatcgtgacattaaagcctctaatgttcttctgggtccagattatgaaccacagattgccgattttgggcttgcaaagtggcttcctaacaagtggactcaccatgctgtgatccccgtagagggcacatttggatacctagcgccggagtactttatgcatggaatcgtggatgagaaaacagatgtttttgcatttggaattctacttttggagattgtaactggacggagacctgttgattcatcaaagcaaaaccttctcctatgggcaaagcctctaatggaatcagggaatattgctgagctagctgatccaagattggaggataaatttgatggagagcaactgtacagggtagtgctaacggcttcatactgtgtcagacaaactgccacgtggcgtcctccaatgagcgaggtgttagagcttctaaccagtggccaagagactgaggttggaaagagctggaggatcccaaagttcacctctgatgaattggatgattactctatggttttgggatacgatgttccttcagacatatatttggaggattatttgtga 1821 0.0 MVLPSPAKILVGLSLDPDDSKEILSWAIRVLANPNDTIVAVHVLVAADKKKRVSVRRSLSQLRQAKAYVISVLGEFAQTCWSKQVNLEARVEFNSTVGEGLVEEAKSINADFLLVRGSRNRTNKNATSKGITKYCFEHAHEGCTMISVGRRIKADQNTNSHSTRFQDKKQPSSRWFKKNKQSENGASSVLEDYISGNKARNRSPRTVLDGLEGQSNSTEDDTFSTRVSSTTYTPSTDSKSKSRSKTRKPHFLFRFIVSFLASPFGRRNFNMSENDKRQPLLKCFSYEQISNATKDFHQDNLVGRGGYSEVYKGDLSDGRTIAVKRLAKDNRDPNKEKEFLMELGVIGHVCHPNTATLVGCCIENGLYLIFNYSQNGNLATALHGKGGDSLDWPIRYKIAIGVARGLHYLHTCCKHRIIHRDIKASNVLLGPDYEPQIADFGLAKWLPNKWTHHAVIPVEGTFGYLAPEYFMHGIVDEKTDVFAFGILLLEIVTGRRPVDSSKQNLLLWAKPLMESGNIAELADPRLEDKFDGEQLYRVVLTASYCVRQTATWRPPMSEVLELLTSGQETEVGKSWRIPKFTSDELDDYSMVLGYDVPSDIYLEDYL 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03282 606 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 8 140 - -
Pste6g03282 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
Pste6g03282 606 MobiDBLite consensus disorder prediction 177 191 - -
Pste6g03282 606 CDD USP_Like 8 140 - -
Pste6g03282 606 FunFam Putative receptor-like serine/threonine-protein kinase 264 372 - -
Pste6g03282 606 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Pste6g03282 606 ProSiteProfiles Protein kinase domain profile. 296 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03282 606 MobiDBLite consensus disorder prediction 208 239 - -
Pste6g03282 606 Pfam Protein kinase domain 296 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03282 606 Gene3D Transferase(Phosphotransferase) domain 1 374 577 - -
Pste6g03282 606 SMART serkin_6 296 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03282 606 Pfam Universal stress protein family 8 140 IPR006016 -
Pste6g03282 606 FunFam Probable receptor-like serine/threonine-protein kinase At5g57670 373 577 - -
Pste6g03282 606 Gene3D HUPs 4 148 IPR014729 -
Pste6g03282 606 SUPERFAMILY Protein kinase-like (PK-like) 269 563 IPR011009 -
Pste6g03282 606 PANTHER OS08G0249100 PROTEIN 73 576 IPR046958 -
Pste6g03282 606 Gene3D Phosphorylase Kinase; domain 1 264 372 - -
Pste6g03282 606 MobiDBLite consensus disorder prediction 156 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03282 Pste-Chr6 21241307 21245290 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03282 284 605 Trihelix Transcription Factor Family AT1G70460 40.058 1.24e-74 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pste6g03282 Pkinase 3.6e-40 CL0016