Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03266 atggggtttgaaaaaaaaattgggaagtatcagcttcttaggactattggagaaggtacattctctaaggttaagctggctgtcaataggaacagtggtcagaaggttgctgtcaaggttaaaagagagatcagaaccatgaaacttctgcatcatcccaatatagttagaattcacgaggttatcggcacaaaaacgaagatatacattgtgatggaatatgcttcaggaggacaactgctagaaaagatgtcctatggagagaggttgaacgagtatgaggcaagaaaactgttccagcaacttattgatgccctggactactgccataacaaaggggtttatcatcgtgatctcaagccagaaaacattcttgttgacagcaagggaaatctaaaagtgtctgattttggattaagtgcattgcaaaagtgtaatgatgtcttaacgacgcagtgtggatccccgtgctatgtggcacctgagcttctattgagcaaggggtacgatggagcagctgctgatgtttggtcgtgtggggtgattctttttgaatttcttgcaggctatttaccatttaacgaccggaacttgatgagcttatatggaaagcggataactataccagatattattgaagatgagtggtttcaaacagattacaagcctgcttttgcatctgaatttgatgagaacattaagttggacgatgttgatgttgctttgaattcatttgaggatgaaaaaaaggagagaacaaggctgggatccaaacacactgtcaatgaaacaatagaaaaaatagaagctgctgcacaagatgcaaaactgtcgatagagaaaatgaacaactttaagataaaagtgcagccgaaacagaaaatgactaggtgttctggatcatacctatccgtccaggtgatcgaagttgctccgactcattgtgttgtagaaatatcaaaatctactggagatctaagactgtacaacaaattttgtgaaagtttatcgaatctgctgaaacaaaaacatggcgtgcgatcacaaagtcaagattctgtagatctatgcgcccctggcagagaaaaacaagatgctggatgctgtaaacagccaaaaaatgaagatagcaaacttcttcgtggctacacatctgcttga 1161 0.0 MGFEKKIGKYQLLRTIGEGTFSKVKLAVNRNSGQKVAVKVKREIRTMKLLHHPNIVRIHEVIGTKTKIYIVMEYASGGQLLEKMSYGERLNEYEARKLFQQLIDALDYCHNKGVYHRDLKPENILVDSKGNLKVSDFGLSALQKCNDVLTTQCGSPCYVAPELLLSKGYDGAAADVWSCGVILFEFLAGYLPFNDRNLMSLYGKRITIPDIIEDEWFQTDYKPAFASEFDENIKLDDVDVALNSFEDEKKERTRLGSKHTVNETIEKIEAAAQDAKLSIEKMNNFKIKVQPKQKMTRCSGSYLSVQVIEVAPTHCVVEISKSTGDLRLYNKFCESLSNLLKQKHGVRSQSQDSVDLCAPGREKQDAGCCKQPKNEDSKLLRGYTSA 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03266 386 Gene3D Phosphorylase Kinase; domain 1 41 79 - -
Pste6g03266 386 Gene3D Transferase(Phosphotransferase) domain 1 80 223 - -
Pste6g03266 386 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Pste6g03266 386 Gene3D Kinase associated domain 1, KA1 229 343 - -
Pste6g03266 386 ProSiteProfiles Protein kinase domain profile. 10 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03266 386 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 335 - -
Pste6g03266 386 SUPERFAMILY Protein kinase-like (PK-like) 7 220 IPR011009 -
Pste6g03266 386 CDD STKc_AMPK-like 9 216 - -
Pste6g03266 386 Pfam Protein kinase domain 10 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03266 386 FunFam Maternal embryonic leucine zipper kinase 2 216 - -
Pste6g03266 386 CDD CIPK_C 246 342 - -
Pste6g03266 386 Gene3D Phosphorylase Kinase; domain 1 2 40 - -
Pste6g03266 386 SMART serkin_6 10 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03266 386 MobiDBLite consensus disorder prediction 360 386 - -
Pste6g03266 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 114 126 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03266 Pste-Chr6 21058313 21062032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03266 72 340 CBL-interacting serine-threonine protein kinases AT5G57630 50.154 1.41e-106 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pste6g03266 Pkinase 1.5e-59 CL0016