Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03260 atgggtcgagctccgtgctgtgacaaggccaatgtgaagaaaggaccatggtctcctgaagaggatgctgcacttaaagcctacattgaaaagaatggaactggtggcaattggattgctcttcctcagaaaattgggctcaagagatgtggaaagagttgcagacttaggtggttaaattacttgaggcctaatatcaagcatggtggatttactgaagaagaagacaacatcatctgcagcctttacattagcattggtagcaggtggtccataattgctgctcagttacctggaaggacagataacgacatcaagaactactggaacactagattaaagaagaaactgcttgggaggcgcaaacaatctaacttcaacacaaaagatacaaataatggaatagaggagaactcttattcaaatgccctaagcacctcagctcttgaaagactccaattgcacatgcaactccaaagccttcaaaaccctttctctttctacaataaccctgcgctgtggcctaagttgcatcctttccaagaaaagatgatccagaccctgcaatctttgagtgatggatctaaccctgtgatgcaaaatgctttgactttcccacatgttgaacaaggacaaaaagatgagttctacaagcgtcaccatgatagtgcaaagatcgataacccacagattcatcttttggagaatattcctgagagtaacaatgaagctccctttgttgcttctgggagtaataatccaatgcactcaagtcttgcaccaataactgaagctattgaacagactaataatgtgggatatcagcaggttggttcactgcaaactgaactagatgacattctcaactacagaacaattgcttatgtgccacaggaagataatcagatcgcagaatttgattgtttcaaggagatgaatgactcaaaggacagcttgatttggtggtccaatgattctgacaccaaatcagcatcctcaaactcctgggattcatctactcctacagctcttctaacacaagggatgttccaagattatgaactgcgttacagtctgtag 1080 0.0 MGRAPCCDKANVKKGPWSPEEDAALKAYIEKNGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFTEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGRRKQSNFNTKDTNNGIEENSYSNALSTSALERLQLHMQLQSLQNPFSFYNNPALWPKLHPFQEKMIQTLQSLSDGSNPVMQNALTFPHVEQGQKDEFYKRHHDSAKIDNPQIHLLENIPESNNEAPFVASGSNNPMHSSLAPITEAIEQTNNVGYQQVGSLQTELDDILNYRTIAYVPQEDNQIAEFDCFKEMNDSKDSLIWWSNDSDTKSASSNSWDSSTPTALLTQGMFQDYELRYSL 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03260 359 CDD SANT 71 113 IPR001005 -
Pste6g03260 359 FunFam Transcription factor RAX3 7 68 - -
Pste6g03260 359 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Pste6g03260 359 Gene3D - 7 68 - -
Pste6g03260 359 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Pste6g03260 359 SMART sant 13 64 IPR001005 -
Pste6g03260 359 SMART sant 67 115 IPR001005 -
Pste6g03260 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Pste6g03260 359 FunFam Transcription factor MYB36 70 139 - -
Pste6g03260 359 CDD SANT 16 62 IPR001005 -
Pste6g03260 359 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Pste6g03260 359 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Pste6g03260 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Pste6g03260 359 Gene3D - 70 142 - -
Pste6g03260 359 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Pste6g03260 359 PANTHER OS09G0431300 PROTEIN 1 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03260 Pste-Chr6 21000090 21001737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03260 1 244 MYB Transcription Factor Family AT5G57620 65.079 2.32e-103 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste6g03260 Myb_DNA-binding 1.4e-12 CL0123