Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03258 atgtgtaataaagggtttgaatgcttgagggagtgtgagagtgtgattgatccgaggccagaattcttcatgatggatagtccaacacgatcaccggcaaccggttcgggttccggtgatgatagccggcgtgttaagttcttgtgcagctttctggggagcataatgcctcgcccccaagatgggaagctgcgttatgttggtggcgagacgcgaattgtgagtgtccagagagatattagctatgaagagttgatggggaagatgagggagctgtatgatggggctgctgtgttaaagtaccagcagcctgatgaggatctcgatgcccttgtctctgttgtgaatgatgatgatgtggttaacatgatggaggagtatgacaaattggggtcaggggatggattcaccaggctcaggatttttctgttttcgcaaatcgagcaggatggttcctcgcatttcattgatggggatgattctgagaggaggtatgttgatgcattgaatagtttaaatgatggttctgactttaggaggttgcaacaaggggactttcctatcattggccctgtcgaggatatccatgtgactgctgatcagttttttaatccaattggtgtggaaagtgggattcatactcacagaagtggtgatctatctatgacgccatataatatgcatcatctcacggcccagcatccgcagacgaggtttaatgaaatggatgctccttggaatcctgcctattactctcccaggcatcatggtctccatgactccagatcgttggttgaatttccatcttctccttcgggtacaaggtaccgtatgtcatttcctgagttgccagataaatgcattgatagagtgcctgatgagtatgcccgtcatcatgtaaaccatcttcctgtgtatgacaatcaaccacaatattctgaaaatgttatgtggatgcctactggagcagcacatgtcgaaaaatcggcttttcctggcaatattcttcatggttcccatgttcttgatggaaataatatatgtgagcagtgtcgaatgggttttcagagaggaaaccaacatctggaacattctagtataagtaatggacttccaccggctgctaatccatgtgcagaatgccccccaccaaatagggatacttttgatgcaaagttacattccacaatctatcccaatgagcataataatgatcataggtctgtttataatgatacacagaatcatgagagagtatggggtttgcagcatccaacaactcctcgggttgaggaatcaagaggacatgtctctggatctggaagagtgagtgatgtcccagttgtaaatttctctcttgggcatggtagtatgactgatggacataccttgtcttccaattttcttcatcagcaagctggaactgaattggggcctgatatgttccctgatcaaactgtgactgctgtaccgcccctacaagttcctccactggaagaatgcaatgtgcgttttggaaattcaccttctccttatggagtagatagtaattatgctgtgccccgtcatccacctggtttctggagaaacactccaattcctgttcatatggagcaatcttatgaggcagctgcgccacctcagcaggtgaacggtatgataaatgcgggattaatcagaggagagggtagtccaggattttttgttggacaagatggtcaaaatcaatgggttgattcctcactgaaattgacaggacataacggtacaaccatcccagaatatccgtatgcacctgctctgaagttgaatccagcaaccctgggtctagaaaatcaacactcagttactgtaggtaccattcatcctccacaggacatgaatgccggtacctgctttgaacctgtgcagcttccaaaatcatctttaaatatagttcacaatcaagaggttttaagaagtgatactcatttgactgaagcaaagagttttgaatcaaataatttgcttggagacagaatagttgtaaaaattgaggacagggttgaacactctgatgtgcagcctgtatctttttcagagcaaaataaaattgctgagaatgcatgtcaagctgctgcttctgttgagattaataattcaaagtcaaaacctgaagtagactgcaggcaggttgaaaaactggctcgtaaggaccattctgttcctgaagattctaagcatttagttgatcaattcagctttttgcctgagttgattgcttctgtaaaaaaggcagcattagaaggtgtcgaggaggtgaaagctgcagctgatgaacatgccaattatcagaaacaaaattcagacaccaaggaagaaacaacaaatgaagtagatctagcaaatgctcatggtgatttagaattggactctgaaaatgaccatgtagatacttctaaaattgagcctacaaaggctgaggaagaagcaattgccaggggattgcagactattaaaaatgatgatttggaggagatccgtgagcttggttctggaacctatggagctgtttatcatgggaaatggaaaggttctgatgttgccattaagagaataaaagcaagttgttttgctggaaggccgtctgaaagatcaagattgattgcagatttctggaaggaggcattgatgttgagttcattgcatcatccaaatgttgtctccttttatggcattgttcgcgatggccctgacggttctttagcgacagtcacagaattcatgattaatggatctttgaaacagttcttgcataagaaagatagaacgatagatcgtcggaagaggctcattatagccatggatgctgcatttgggatggagtatttgcatggaaaaaacattgtgcattttgatttgaaatgtgagaatctattggtcaatatgagagatcctcaacgccctgtctgcaagattggtgatttgggtttatcaaaggttaaacaccacactctagtgtccggaggagtacgggggactttgccatggatggcacctgaacttcttagtgggaaaagcaatatggtgtcagagaagattgatgtttattcattcggaatagttatgtgggaattactcaccgggaatgaaccctacgccgatatgcattgtgcttcaataataggaggaattgtgaacaacactttacgtcctcaaatcccaacctggtgtgatcctgagtggaagtctctaatggaaagttgttgggcttctgaacctgtagaaaggccatcattttcagaaatttccaagaattacttgcactatagcatggattctctcccagaagcagcatggtgttctgaagaaagctatatgtggaacatcaatatgtcacattttttacacgtgatcagggagatggtagcaatagttgttgctttaccatcactaaagaaccatgccttctggagagatgtgtacataaatcaaccaacgacatgcctcctgtgctttttcacatggagaggataa 3516 0.0 MCNKGFECLRECESVIDPRPEFFMMDSPTRSPATGSGSGDDSRRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVQRDISYEELMGKMRELYDGAAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSGDGFTRLRIFLFSQIEQDGSSHFIDGDDSERRYVDALNSLNDGSDFRRLQQGDFPIIGPVEDIHVTADQFFNPIGVESGIHTHRSGDLSMTPYNMHHLTAQHPQTRFNEMDAPWNPAYYSPRHHGLHDSRSLVEFPSSPSGTRYRMSFPELPDKCIDRVPDEYARHHVNHLPVYDNQPQYSENVMWMPTGAAHVEKSAFPGNILHGSHVLDGNNICEQCRMGFQRGNQHLEHSSISNGLPPAANPCAECPPPNRDTFDAKLHSTIYPNEHNNDHRSVYNDTQNHERVWGLQHPTTPRVEESRGHVSGSGRVSDVPVVNFSLGHGSMTDGHTLSSNFLHQQAGTELGPDMFPDQTVTAVPPLQVPPLEECNVRFGNSPSPYGVDSNYAVPRHPPGFWRNTPIPVHMEQSYEAAAPPQQVNGMINAGLIRGEGSPGFFVGQDGQNQWVDSSLKLTGHNGTTIPEYPYAPALKLNPATLGLENQHSVTVGTIHPPQDMNAGTCFEPVQLPKSSLNIVHNQEVLRSDTHLTEAKSFESNNLLGDRIVVKIEDRVEHSDVQPVSFSEQNKIAENACQAAASVEINNSKSKPEVDCRQVEKLARKDHSVPEDSKHLVDQFSFLPELIASVKKAALEGVEEVKAAADEHANYQKQNSDTKEETTNEVDLANAHGDLELDSENDHVDTSKIEPTKAEEEAIARGLQTIKNDDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERSRLIADFWKEALMLSSLHHPNVVSFYGIVRDGPDGSLATVTEFMINGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKHHTLVSGGVRGTLPWMAPELLSGKSNMVSEKIDVYSFGIVMWELLTGNEPYADMHCASIIGGIVNNTLRPQIPTWCDPEWKSLMESCWASEPVERPSFSEISKNYLHYSMDSLPEAAWCSEESYMWNINMSHFLHVIREMVAIVVALPSLKNHAFWRDVYINQPTTCLLCFFTWRG 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03258 1171 Gene3D - 63 147 - -
Pste6g03258 1171 Gene3D Transferase(Phosphotransferase) domain 1 923 1136 - -
Pste6g03258 1171 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 925 1112 - -
Pste6g03258 1171 PRINTS Tyrosine kinase catalytic domain signature 919 932 IPR001245 GO:0004672|GO:0006468
Pste6g03258 1171 PRINTS Tyrosine kinase catalytic domain signature 956 974 IPR001245 GO:0004672|GO:0006468
Pste6g03258 1171 PRINTS Tyrosine kinase catalytic domain signature 1071 1093 IPR001245 GO:0004672|GO:0006468
Pste6g03258 1171 PRINTS Tyrosine kinase catalytic domain signature 1027 1049 IPR001245 GO:0004672|GO:0006468
Pste6g03258 1171 SMART PB1_new 59 144 IPR000270 GO:0005515
Pste6g03258 1171 Pfam Protein tyrosine and serine/threonine kinase 838 1098 IPR001245 GO:0004672|GO:0006468
Pste6g03258 1171 PANTHER SERINE-THREONINE PROTEIN KINASE 111 1098 - -
Pste6g03258 1171 Coils Coil 767 787 - -
Pste6g03258 1171 CDD STKc_MAP3K-like 843 1096 - -
Pste6g03258 1171 Gene3D Phosphorylase Kinase; domain 1 823 922 - -
Pste6g03258 1171 ProSiteProfiles Protein kinase domain profile. 837 1105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03258 1171 CDD PB1_UP2 48 144 - -
Pste6g03258 1171 ProSitePatterns Serine/Threonine protein kinases active-site signature. 962 974 IPR008271 GO:0004672|GO:0006468
Pste6g03258 1171 SUPERFAMILY Protein kinase-like (PK-like) 829 1097 IPR011009 -
Pste6g03258 1171 ProSitePatterns Protein kinases ATP-binding region signature. 843 864 IPR017441 GO:0005524
Pste6g03258 1171 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 64 146 - -
Pste6g03258 1171 SMART serkin_6 837 1101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03258 1171 Pfam PB1 domain 60 145 IPR000270 GO:0005515
Pste6g03258 1171 SUPERFAMILY CAD & PB1 domains 61 147 - -
Pste6g03258 1171 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 830 924 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03258 Pste-Chr6 20961020 20968132 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03258 40 1098 MAP Kinase Kinase Kinase AT5G57610 53.520 0.0 1022
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pste6g03258 PK_Tyr_Ser-Thr 9.1e-61 CL0016