Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03252 atgcagaaaccaacgaccgacgcaattagtatggggaaaaggaacctggatgggggagaagatgatcagcctgaacggaagaggcctgctcttgccagtgtaattgtggaagctctgaaggtggacagtttacaaaagctttgctcatctctagaacctattcttcgtagagttgtgagtgaggaagtggagcgtgctttagcaaagttaggtcctgcaagacttagtggaaggtctcctcctaaaatgattgaaggccctgatggtagaagtttgcagctgcaatttaggtcccggctatctcttcccctattcacaggaggaaaagttgaaggcgagcagggggctccaatacatgttgttcttattgatgccaatagtggcaatgttgtaacatctggacctgagtcctgtgttaaacttgatgttgttgtcctcgagggtgattttaacaatgaagatgatgaagattggactctagaagattttgaaagccatatggtaaaagaacgtgaaggaaagagacctttgttaactggggatctgcaagtgacactcaaggaaggagttggaacattaggggatctgacatttacagataattcaagctggataaggagccgtaaattcaggcttggcctgaaggttgcatcaggtttttgcgagtccatacgtattcgtgaagctaagacagtggctttctcagttaaagatcatagaggagaattatacaagaagcattatcctcctgcattgactgatgaagtgtggagattggagaagataggcaaggatgggtcatttcacaagaagctgaataacgcagggataataacagttgaagattttcttcggcttgtggttaaagatcaacagaaattgcgaaatatccttgggagtggtatgtcaaacaagatgtgggaggctcttatagaccatgcaaagacctgcgttttaagtgggaaactctatgtttactatccagaagatgcaagaaatgttggtgttatttttaacaacatctatgagctgcgtggccttatatcaggagagcaattcttttctgctgattctctcactgataaccagaaggtttatgtagattcattggtgaagaaagcatatgaaaattgggatcaggttgtggattatgatggaaagtcacttgtgaatgccaaccaaaataacaggtctgttgtctctgaaaatgaacttcgtgttgaaattgattatggtagtggtttagatcaacttcaactaccgtcgcttccagtgtctggtgttccttcagaacagcaaatgaattcagggatacctgttgcaggttatagtgataatatggtaacacgatatccaacccagacattgatttcaaactccggctcccgcagtcagtttgacagctcattatatctgtctaatgacctattaatcagcaatgctcaccaaagcgctagaaatgaacatggcacggttggcttagctcttggtcctcctcaatcatcaggattccatgcgggcagctcttcttctattcagccatctactctaaatccttttgatgattggtcacacaacagggacaaaggagttgatgaattcttttcagaagaagaaatccgcctcaaaagtcatgaaatgctagagaatgaagatatgcagcacttgcttcgcctcttcagtatgggaggtcatggctccatgagttctgaggatagctattcattcccatcattcatgccatctcccaatataccaaactatgacgaggatcgctcccgccctggcagagctgttgtgggatggttgaagatcaaggcagcaatgaggtggggtttctttatcaggaagatagcagctgagaagcgggctcagatagaggagttagatgaatag 1896 0.0 MQKPTTDAISMGKRNLDGGEDDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPARLSGRSPPKMIEGPDGRSLQLQFRSRLSLPLFTGGKVEGEQGAPIHVVLIDANSGNVVTSGPESCVKLDVVVLEGDFNNEDDEDWTLEDFESHMVKEREGKRPLLTGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGFCESIRIREAKTVAFSVKDHRGELYKKHYPPALTDEVWRLEKIGKDGSFHKKLNNAGIITVEDFLRLVVKDQQKLRNILGSGMSNKMWEALIDHAKTCVLSGKLYVYYPEDARNVGVIFNNIYELRGLISGEQFFSADSLTDNQKVYVDSLVKKAYENWDQVVDYDGKSLVNANQNNRSVVSENELRVEIDYGSGLDQLQLPSLPVSGVPSEQQMNSGIPVAGYSDNMVTRYPTQTLISNSGSRSQFDSSLYLSNDLLISNAHQSARNEHGTVGLALGPPQSSGFHAGSSSSIQPSTLNPFDDWSHNRDKGVDEFFSEEEIRLKSHEMLENEDMQHLLRLFSMGGHGSMSSEDSYSFPSFMPSPNIPNYDEDRSRPGRAVVGWLKIKAAMRWGFFIRKIAAEKRAQIEELDE 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03252 631 MobiDBLite consensus disorder prediction 502 521 - -
Pste6g03252 631 PANTHER OS02G0177800 PROTEIN 11 553 IPR012416 GO:0005516
Pste6g03252 631 Pfam Calmodulin binding protein central domain 252 317 IPR046830 -
Pste6g03252 631 MobiDBLite consensus disorder prediction 499 523 - -
Pste6g03252 631 Pfam Calmodulin binding protein C-terminal domain 322 384 IPR046829 -
Pste6g03252 631 Pfam Calmodulin binding protein-like N-terminal domain 92 239 IPR046831 -
Pste6g03252 631 MobiDBLite consensus disorder prediction 14 28 - -
Pste6g03252 631 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03252 Pste-Chr6 20897414 20906195 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03252 1 626 Calmodulin-binding Proteins AT5G57580 66.303 0.0 837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03252 6 20897414 20906195 Pste6g03252 6 20897414 20906195 ECH