Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03237 atggcacctcaaccagaagaacaagaattcatcttccggtccccactgagggatattcccattcccacacaccttccattacactcgtactgcttcgaaaacctgtccaagttcgaacagcgtccatgcctgatagacggagaaaccggcgacatactgagctacggcgaagtggagctgaccactaggcgggtggcagccggcctccacaatatgggaatcctccagggtgacgtcatcatgctcgtcctccgcaactgcccgcagttcgccctggccttcctgggcgcctcccactgcggggcggtggtcaccacagcgaaccccttctacacgccggcagagctggccaagcaagcgagggccacgaaaacaagggtggtgataacgcacgcggcgtacgtggagaaagtgaagagtttggcggaggagagcggagtgatggtgatgtgcattgaggattcggaagaggagggggttttgcatttctctgcgctgactaacgcggacgaaacggaagcccctgacgttaagattaacccagaggacctggttgcgcttccgttctcttctggcacgtcggggctccccaagggggttatgctgtcgcataaaaacttggtgaccacgatagcgcagttggtggacggcgaaaacccccaccagtacactcacagcgaggacgtgttactctgcgtgctgcctatgtttcacatatatgcactcaattccattttgctctgcgggattcgatctggtgcggccgttcttattgtgcacaagtttgagatgaacacactgctcgacctgatccagaagtaccgtgtcacggttgcctccgttgtgcctcccatcgttctctccttggttaagagcggagaggcgcatcgctacgacctctcctctgttcgcgctgtcgtcactggcgccgcacccttgggccgcgacctccaagaatccctcaaggctaggctaccccacgccacttttggacagggatatgggatgacagaagcaggaccacttaccattagcatggcatttgcaaaagaaccctcgaagacaaaaccaggtgcatgcggaacagttgtgagaaacgccgagatgaaaatcgtggatacacaaacgggtgtttcgcttccaagaaacaaacccggtgaagtttgcataagaggcacaaaggttatgaaaggatatctaaatgacccagaggctacagagagaactgttgataaagaaggatggctacacacaggagatattggtttcattgacgatgatgacgaactcttcattgttgatcgattaaaggaacttattaaatacaaaggattccaagtagctcctgctgagcttgaagcaatgttgattgccaacccaaacatttccgaagctgctgttgtacccatgaaagatgaagctgctggagaaattccagttgcatttgtagtaagatcaaatggttctgagatcactgaggatgaaatcaagcaatacatttcaaaacaggtggtgttttataagagaatcggtagagttttcttcactgattctattcctaaagcaccctcaggaaagattttgcgaaaggtgttaactgcaagacttaatgaaggagatttgtcgttgagcggccgaattagagaagaacgcagagacaaccaccgagagtcaaggagagatagaccccgagatgaaggaaggaggaggagtgaacaattcggctcagaagaggcacttgtgagctactcaaaatgtaaatgtcatctccctgggctcatctcaacaccaaccacattatccgaccatcacttcacagataaggatttcaaaggcatagatttgctgcaagacgatccaatgttaataacggtggaggcagccaattttgcagtctggaaaacacttatagatcaagctgccgaagtgctagggattgatcctaagattctatgccataagttgtctatatgccacaagctaaacatgtcttgcagaagaagaggaaacactagtgacggtggcgagaagacttcagccttattttcagagtcacaagtggtagtaaagactaactacccaatcccaaagctcctccataaacctgagctctttgggagacttatatcttgtcatcatcgagcacatcccgagggaaagcaacgagcgagtggacctgctagccaagctggcgagcatgaaaaagcttgggcatcacaagttagttatatagcaaatgctgaagggcccaagtatcgagtaatgtgttcaacactcattgaggaggaggtaaattggatggtacccattagagcctatattaagcgagggggacatcccactgatgagaaggaagcaaaatgtctacgagcaaggttggcaaggttcctaatcataagagacgagctatttaaaagggggttacttgacatccctcttgaagtgcttaaccttgacgcaaagagcatatgccttaaagagttacatgatgaaatatatggattctatttcggagcacatgttgttattccagtcgagctaggggaactcacacttcggtgcaagttgttcgacccaagctggaacaataggaaagttttgttgaccttgacctcgctcgagagcttagagataaagcccaaatcagtgtggaagcttccaagagtgaactgtaagaaaattcaacaacaaggtcacgccaaggtatttcaaggaaggaaatctcatttggagaatgcacgctaa 2745 0.0 MAPQPEEQEFIFRSPLRDIPIPTHLPLHSYCFENLSKFEQRPCLIDGETGDILSYGEVELTTRRVAAGLHNMGILQGDVIMLVLRNCPQFALAFLGASHCGAVVTTANPFYTPAELAKQARATKTRVVITHAAYVEKVKSLAEESGVMVMCIEDSEEEGVLHFSALTNADETEAPDVKINPEDLVALPFSSGTSGLPKGVMLSHKNLVTTIAQLVDGENPHQYTHSEDVLLCVLPMFHIYALNSILLCGIRSGAAVLIVHKFEMNTLLDLIQKYRVTVASVVPPIVLSLVKSGEAHRYDLSSVRAVVTGAAPLGRDLQESLKARLPHATFGQGYGMTEAGPLTISMAFAKEPSKTKPGACGTVVRNAEMKIVDTQTGVSLPRNKPGEVCIRGTKVMKGYLNDPEATERTVDKEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEAMLIANPNISEAAVVPMKDEAAGEIPVAFVVRSNGSEITEDEIKQYISKQVVFYKRIGRVFFTDSIPKAPSGKILRKVLTARLNEGDLSLSGRIREERRDNHRESRRDRPRDEGRRRSEQFGSEEALVSYSKCKCHLPGLISTPTTLSDHHFTDKDFKGIDLLQDDPMLITVEAANFAVWKTLIDQAAEVLGIDPKILCHKLSICHKLNMSCRRRGNTSDGGEKTSALFSESQVVVKTNYPIPKLLHKPELFGRLISCHHRAHPEGKQRASGPASQAGEHEKAWASQVSYIANAEGPKYRVMCSTLIEEEVNWMVPIRAYIKRGGHPTDEKEAKCLRARLARFLIIRDELFKRGLLDIPLEVLNLDAKSICLKELHDEIYGFYFGAHVVIPVELGELTLRCKLFDPSWNNRKVLLTLTSLESLEIKPKSVWKLPRVNCKKIQQQGHAKVFQGRKSHLENAR 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03237 914 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 533 - -
Pste6g03237 914 Pfam AMP-binding enzyme 33 442 IPR000873 -
Pste6g03237 914 Gene3D - 5 436 IPR042099 -
Pste6g03237 914 Gene3D - 437 539 IPR045851 -
Pste6g03237 914 ProSitePatterns Putative AMP-binding domain signature. 187 198 IPR020845 -
Pste6g03237 914 CDD 4CL 21 532 - -
Pste6g03237 914 FunFam Long-chain-fatty-acid--CoA ligase FadD 13 437 - -
Pste6g03237 914 Pfam AMP-binding enzyme C-terminal domain 451 526 IPR025110 -
Pste6g03237 914 MobiDBLite consensus disorder prediction 547 573 - -
Pste6g03237 914 FunFam 4-coumarate--CoA ligase 2 438 539 - -
Pste6g03237 914 SUPERFAMILY Acetyl-CoA synthetase-like 7 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03237 Pste-Chr6 20696689 20708183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03237 9 504 Monolignol Biosynthesis Gene Families AT1G51680 63.168 0.0 654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03237 6 20696689 20708183 Pste6g03237 6 20696689 20708183 ECH