Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03195 atgtattcgagtccaagccagtttgatggcaatgcagccttctctggtggtggattcatgccttctcagaccactcagggcactgatccttccttcatgccctccaagaatcgcgatgcccagtccttgcttcctctgacagtgaagcagatatatgatgcgtttcagtcaagtgatgataaaaccaatttgattgttgacggtgtggacattaacaatgttactcttgttgggagggtgtgcaacaaagttggacgaattactgatgttacttttgtgcttgatgatggtactggaaggattgagtgtaataaatggcttcaggaagctgttgatgcaaatgaagctgagggtatcttgcctgtgactgactttaatgaaattgccagtcatttcattgattgcatatatgtgcatctctataattccaggttacggactagtgtccctaaccagcaacatgtgatgaattccatgccaacaacttccacagtaggttatcaagcccaacctgttccaccaacaaaccagttttatgatcaacatatcaatggtcagaagagtgttgaagctatggttgtagattttttgcatcttccagctaataggtcaaggagtgagggagtggctcgtgatctcattgcacagcatcttggaatttctttggataagctcatgctggctgttcaaaatcttattgatgaaggtgcaatttatgaaactatatctgatcactataagtcaatcgtcaatggttga 759 0.0 MYSSPSQFDGNAAFSGGGFMPSQTTQGTDPSFMPSKNRDAQSLLPLTVKQIYDAFQSSDDKTNLIVDGVDINNVTLVGRVCNKVGRITDVTFVLDDGTGRIECNKWLQEAVDANEAEGILPVTDFNEIASHFIDCIYVHLYNSRLRTSVPNQQHVMNSMPTTSTVGYQAQPVPPTNQFYDQHINGQKSVEAMVVDFLHLPANRSRSEGVARDLIAQHLGISLDKLMLAVQNLIDEGAIYETISDHYKSIVNG 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03195 252 SUPERFAMILY "Winged helix" DNA-binding domain 184 249 IPR036390 -
Pste6g03195 252 SUPERFAMILY Nucleic acid-binding proteins 43 143 IPR012340 -
Pste6g03195 252 PANTHER REPLICATION PROTEIN A-RELATED 7 249 IPR040260 -
Pste6g03195 252 Gene3D - 39 145 IPR012340 -
Pste6g03195 252 PIRSF RPA32 2 118 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Pste6g03195 252 PIRSF RPA32 115 250 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Pste6g03195 252 Pfam Replication protein A C terminal 139 244 IPR014892 -
Pste6g03195 252 Gene3D - 180 250 IPR036388 -
Pste6g03195 252 CDD RPA2_DBD_D 73 140 - -
Pste6g03195 252 MobiDBLite consensus disorder prediction 13 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03195 Pste-Chr6 20251164 20257100 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03195 1 249 Core DNA Replication Machinery Family AT2G24490 38.849 2.89e-60 190
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03195 6 20251164 20257100 Pste6g03195 6 20251164 20257100 ECH