Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03184 atgaggtatattcggagcaacagcttcaagaggctcttctccctgagaagacgcagttcaagggaacaagttctgagtcctaacagtgaagaaaacgatgagattcttctgcatgatgaaggaccttctcgaagaccctcttggaagtgtttctcttatgaagagttgtttgatgccacggatggcttcagctcagaaaatttggtgggaaaaggaggatatgccgaggtttacaagggaacaatgaatggtggtgatgaaattgctgtgaagagactcacaagaacctcgagggatgagagaaaggagaaagagtttttgacagagattggtacaattggtcatgtgaaccattccaacgttttgcctcttttgggctgttgtattgacaatggcctttatcttgtttttgagctatcttccagaggttctgttgcctcccttcttcatgatgaaaaattgcctcctttagattggaaaacaaggcataagatagccattggaactgcacgtgggcttcactacttgcacaagggctgcaagagaaggataatccaccgagacatcaaggcttcaaacattttgttgacaaaggattttgagccacagatatctgattttggactggcaaaatggcttccatcccaatggactcaccattcaattggccctatagaagggacatttggacatttggccccagagtactacttgcatggagttgtggacgagaagacagatgtatttgcctttggtgtgttcttgctagaagtaatctctggcaggaaaccagtggatgggtctcaccaaagcttacatagctgggcgaaaccaatattgaacaagggtgagatacaagagttggtggatccaaggcttgaaggggcttatgacgtgacacagttaaaaagattttccttcgctgcctctctttgcatccgagcatcttctacttggcgacctaccatgactcaggtattagagataatggaggagggagaaacggatatagagaagtggaaaatgccagaggaagaagaagagcaagaggaggagttctggggttttgaagatcttgaatatgaatatgacagctccttctcgatgtctttacttgactccattggaagcacttag 1137 0.0 MRYIRSNSFKRLFSLRRRSSREQVLSPNSEENDEILLHDEGPSRRPSWKCFSYEELFDATDGFSSENLVGKGGYAEVYKGTMNGGDEIAVKRLTRTSRDERKEKEFLTEIGTIGHVNHSNVLPLLGCCIDNGLYLVFELSSRGSVASLLHDEKLPPLDWKTRHKIAIGTARGLHYLHKGCKRRIIHRDIKASNILLTKDFEPQISDFGLAKWLPSQWTHHSIGPIEGTFGHLAPEYYLHGVVDEKTDVFAFGVFLLEVISGRKPVDGSHQSLHSWAKPILNKGEIQELVDPRLEGAYDVTQLKRFSFAASLCIRASSTWRPTMTQVLEIMEEGETDIEKWKMPEEEEEQEEEFWGFEDLEYEYDSSFSMSLLDSIGST 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03184 378 FunFam Putative receptor-like serine/threonine-protein kinase 30 139 - -
Pste6g03184 378 FunFam Putative receptor-like serine/threonine-protein kinase 141 355 - -
Pste6g03184 378 PANTHER OS08G0249100 PROTEIN 21 359 IPR046958 -
Pste6g03184 378 SMART serkin_6 63 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03184 378 Gene3D Transferase(Phosphotransferase) domain 1 141 355 - -
Pste6g03184 378 Pfam Protein tyrosine and serine/threonine kinase 66 271 IPR001245 GO:0004672|GO:0006468
Pste6g03184 378 ProSiteProfiles Protein kinase domain profile. 63 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03184 378 Gene3D Phosphorylase Kinase; domain 1 37 139 - -
Pste6g03184 378 SUPERFAMILY Protein kinase-like (PK-like) 44 330 IPR011009 -
Pste6g03184 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Pste6g03184 378 ProSitePatterns Protein kinases ATP-binding region signature. 69 91 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03184 Pste-Chr6 20123666 20128581 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03184 51 331 Trihelix Transcription Factor Family AT1G70460 45.172 1.50e-72 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pste6g03184 PK_Tyr_Ser-Thr 9.9e-41 CL0016