Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03155 atggctttccacgaccatctccagcacgaaatagccttccagcgttacacggaggagcaagacttgagcgagaatagagacatgcaccagaggctcccaccgacatggctcagcaacaacaacgttaacgcgcgtcaacagaatttcctcgacaacaccaccgacaaaaccgtggatcggaaccgcggcgaatccgaggatttgagggactacaaagccgacattctaggacaccctctctacgatcaactattatccgcacatgtctcgtgtctcaggattgccactcccgtcgaccagcttcccaggatcgacgcgcagcttcagcagtcgcagcgcgtgcttcaaaagtactctgcactctcaaataacggggtcatcgatgagaaggagcttgatcagttcatgacccattatgttctgttgctctgtgcctttaaagaacaactgcaacagcatgtccgtgttcatgccatggaggcagtgatggcttgttgggatctggagcagtctctgcaaagcttgacaggtaatttttcagcgttataa 549 0.0 MAFHDHLQHEIAFQRYTEEQDLSENRDMHQRLPPTWLSNNNVNARQQNFLDNTTDKTVDRNRGESEDLRDYKADILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQQSQRVLQKYSALSNNGVIDEKELDQFMTHYVLLLCAFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGNFSAL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03155 182 Pfam KNOX2 domain 128 176 IPR005541 GO:0003677|GO:0005634
Pste6g03155 182 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 51 153 - -
Pste6g03155 182 SMART KNOX2_2 122 177 IPR005541 GO:0003677|GO:0005634
Pste6g03155 182 SMART KNOX1_2 69 113 IPR005540 GO:0003677|GO:0005634
Pste6g03155 182 Pfam KNOX1 domain 71 112 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03155 Pste-Chr6 19794269 19796308 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03155 71 177 Homeobox Transcription Factor Family AT5G25220 80.909 1.50e-57 184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03155 6 19794269 19796308 Pste6g03155 6 19794269 19796308 ECH
Pste6g03155 6 19794269 19796308 Pste2g00951 2 10129169 10136397 PCT