Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03136 atggctgaacaaaccgagaaggcttttcttaagcaaccaaaagtgttcctcagctctaataaatctgggaagggaaagagacctggaaagggagggaaccgcttctggaaatccattgggcttggatttaagactcccagggatgccattgaaggtacctatattgacaagaagtgccctttcactggtaatgtttctatccgtggtcgtatcttggctggaacatgtcatagtgctaagatgaacaggaccattattgttaggagaaactatctccattttattaagaagtatcagagatatgagaagaggcattcaaacattcctgctcatatatcaccttgtttccgtgtgaaggaaggagatcatgttattattggtcaatgcaggcctctttcaaagacagttaggttcaatgtgttgaaagtgatccctgctggatcttccagtggtgcaaagaaggcatttactggaatgtga 480 0.0 MAEQTEKAFLKQPKVFLSSNKSGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03136 159 Gene3D - 1 158 - -
Pste6g03136 159 SUPERFAMILY Nucleic acid-binding proteins 68 147 IPR012340 -
Pste6g03136 159 FunFam 40S ribosomal protein S11 1 158 - -
Pste6g03136 159 PRINTS Ribosomal protein S17 family signature 88 111 IPR000266 GO:0003735|GO:0005840|GO:0006412
Pste6g03136 159 PRINTS Ribosomal protein S17 family signature 131 138 IPR000266 GO:0003735|GO:0005840|GO:0006412
Pste6g03136 159 PRINTS Ribosomal protein S17 family signature 121 131 IPR000266 GO:0003735|GO:0005840|GO:0006412
Pste6g03136 159 Pfam Ribosomal protein S17 74 142 IPR000266 GO:0003735|GO:0005840|GO:0006412
Pste6g03136 159 Pfam Ribosomal_S17 N-terminal 4 72 IPR032440 -
Pste6g03136 159 ProSitePatterns Ribosomal protein S17 signature. 121 133 IPR019979 GO:0003735|GO:0005840|GO:0006412
Pste6g03136 159 NCBIfam 30S ribosomal protein S17 55 143 IPR028333 -
Pste6g03136 159 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 10 150 IPR000266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03136 Pste-Chr6 19649613 19651800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03136 1 159 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 89.937 4.13e-98 278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03136 6 19649613 19651800 Pste6g03136 6 19649613 19651800 ECH