Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03119 atgttgcaagtgaagggagggagaagaccaccttgggtgggacttggagctgccgtgtgggttcagattgcttcaggaaatggctacactttccctctctattctcattcattgaaatccattttgggtttcaaccagagccagatcacccttcttggtgttgccaatgatattggtgagaatgttggccttcttcccggccttgcctgcaacaagttccctccttggctcattctcttcatcggtgctctcttctctttccttggtttcggtcttctctgccttgccatcaccaaaacacttgtctcccttcctttcatcttgctatggtttggccttgctgttgctaccaacagttgtgcgtggttatcgactgctgttcttgtcaccaacatgagaaatttccctgtgagtagaggcacagttgcagggatcctgaaaggttatgcgggtctcagcgctgcagtttttactcaaatttacagcgctgtttttcataattcttcctccaagttcctgctgtttctagctattggtattcctgctttatgctttagtaccatgtttctcgttcggccttgtactccagcttctggggaagattcttctgaaaagttgcattttcttttcatccaaggggcaagtgtggccttgggtttatacatacttggaacaacaatacttgacaactcagtcctcataagtgatgaagtgtcgtatgttttgttggctgtgatgattctccttctcttggctccacttgttatccctataaagatgacactgtgccccagaaaagcatctgaagcagagacggcagagcaacatgttgggtcttcagagccaattcaagatggcaaagtggacaacatggagccactgctatcatgttcatcagcgagtggccttggaagttttaacgatgtggtggatggttcgggtgaggtggctatgctgctagctgagggggagggagcagtgaggaagaagagaaggcccaaaagaggggaagatttcaagtttactgaggctctagtaaaggcagatttctggctactgtttttcgtttactttgtgggtgtcggaactggggttactgttcttaataatctggctcaaataggcattgcacaaggtgtggaagataccactatcttgctgtcacttttcagctttttcaactttgtgggtcggcttggtggaggagttctttcagaacattacgtcaggacaaaaacgattccgaggacaatttggatgacatgcacgcagataattatgatcttcctgtaccttctgtttgcctattccatcaatggaaccctttatcccgctattgcaattcttggtatctgctatggcgtgcacttttctgtggtgattcccactgtttcggagctttttggtttgaaacactttggtttattgttcaacttcatggctttggggaatccgcttggtgcatttcttttctcggctcttctagctggacatatatatgacaatgaggcaacaaagcagcatgctgtaggcctcgttgcttcaagtgttacctgtgtgggtccaaactgttttaagctaacctttttgactctggctgctgtgtgtgttgcgggtaccatctccagcattatcttgactataagaattaagcccgtttaccaaatgctttattccgggggttcttttaagctacctcactcttcaggccactaa 1716 0.0 MLQVKGGRRPPWVGLGAAVWVQIASGNGYTFPLYSHSLKSILGFNQSQITLLGVANDIGENVGLLPGLACNKFPPWLILFIGALFSFLGFGLLCLAITKTLVSLPFILLWFGLAVATNSCAWLSTAVLVTNMRNFPVSRGTVAGILKGYAGLSAAVFTQIYSAVFHNSSSKFLLFLAIGIPALCFSTMFLVRPCTPASGEDSSEKLHFLFIQGASVALGLYILGTTILDNSVLISDEVSYVLLAVMILLLLAPLVIPIKMTLCPRKASEAETAEQHVGSSEPIQDGKVDNMEPLLSCSSASGLGSFNDVVDGSGEVAMLLAEGEGAVRKKRRPKRGEDFKFTEALVKADFWLLFFVYFVGVGTGVTVLNNLAQIGIAQGVEDTTILLSLFSFFNFVGRLGGGVLSEHYVRTKTIPRTIWMTCTQIIMIFLYLLFAYSINGTLYPAIAILGICYGVHFSVVIPTVSELFGLKHFGLLFNFMALGNPLGAFLFSALLAGHIYDNEATKQHAVGLVASSVTCVGPNCFKLTFLTLAAVCVAGTISSIILTIRIKPVYQMLYSGGSFKLPHSSGH 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03119 571 Pfam Nodulin-like 11 258 IPR010658 -
Pste6g03119 571 SUPERFAMILY MFS general substrate transporter 11 195 IPR036259 -
Pste6g03119 571 CDD MFS_Mch1p_like 10 540 - -
Pste6g03119 571 SUPERFAMILY MFS general substrate transporter 237 552 IPR036259 -
Pste6g03119 571 Gene3D MFS general substrate transporter like domains 347 554 IPR036259 -
Pste6g03119 571 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03119 Pste-Chr6 19421960 19429634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03119 2 571 Nodulin-like Gene Family AT1G80530 56.643 0.0 653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03119 6 19421960 19429634 Pste6g03119 6 19421960 19429634 ECH
Pste6g03119 6 19421960 19429634 Pste2g01000 2 10653183 10657338 PCT