LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste6g03089	atgggagcgacgattctcccagatctcggcaccgagattttcattcccgtctgcgccgtcgtcggaatagccttcgctctcttccagtggtttctcgtctccggcgtcaagctctccgctgccagagacacctctcccaacgccgccggcaaaaatggctacagcgattatctcatcgaagaagaggaaggcatcaacgaccacaacgttgttctcaaatgtgccgaaatccagaacgccatttccgaaggagcaacctctttcctttttaccgaatacaagtatgttggaatcttcatggtggcttttgccattttgatattcctcttccttggctctgtggaaggattcagcaccagctaccagacctgcacctacgataaaactaaaatgtgtaagccagctcttgccactgctgttttcagcaccgtatcttttcttcttggtggtgtcacgtcgcttatttctggattccttggaatgaaaattgcaacctatgccaacgcaagaaccaccctcgaggctagaaagggcgttgggaaggctttcattactgcatttagatctggtgcagttatggggtttctccttgctgcaaatggtcttttggttctttacattgccatcaacttgttcaagatttactatggtgatgattggggtggtctttttgaggccatcactggttatggtcttggtggctcctctatggctttgtttggaagagttggtggaggaatctataccaaggctgcggatgttggtgctgaccttgttggcaaggttgaaagaaacattcctgaagatgacccaagaaatccagctgtgattgctgataatgttggtgataatgttggggatatagctggtatgggatccgatctttttggttcatatgccgagtcatcctgtgctgctcttgttgttgcttccatctcttcttttggggtgaatcatgagtttactgctatgttatatcctctcatcgtcagttctgtcggtatccttgtttgtttgctcaccaccttatttgcaactgacttttttgagattaaggctgtaaaggagattgagcctgcattgaaaaagcagctcattatctccactgcattgatgactattggcattgccattgttagttggattgcactgccaacttccttcactatcttcaattttggagtacagaaagacgtcaagagttggcagctatttttgtgtgttgctgttggtctttgggcagggcttattattggatttgtaactgagtactacacaagcaatgcatatagccctgtgcaggacgttgcagactcttgcagaactggtgctgcaactaatgttatatttggccttgccttgggatacaaatctgttattattccaatttttgccattgcaattagtatttttgtcagtttcacctttgctgccatgtatggtattgctgttgctgcacttgggatgttgagtaccatagccactggattggccattgatgcatatggtccaattagtgacaatgctggaggtattgctgagatggctggtatgagtcacaggattcgtgagagaactgatgcccttgatgctgctggaaacacgactgccgcaattgggaagggttttgctattggttctgctgcccttgtatctctggccctctttggtgccttcgtgagcagagctgctattacaactgttgatgttttgactccaaaggtttttattggtttgattgtgggtgccatgcttccttactggttttctgccatgacaatgaagagtgtgggaagtgctgctctgaagatggttgaggaagtgcgcaggcaattcaatactattccaggattgatggagggaaccgccaagcctgactatgccacttgtgttaagatctccactgatgcttctattaaagaaatgattccaccgggtgcccttgtcatgcttacccctcttgttgtagggatcctttttggtgttgaaacactttctggtgtccttgctggatctttggtgtctggtgtacagattgctatctctgcatccaacactggtggtgcttgggataatgctaagaagtatattgaggctggtgcttctgagcatgcaagaagccttggtcccaaagggtcagactgtcacaaggcagcagttattggtgacaccattggagaccctctcaaggatacatctggaccatcacttaacatcctcatcaagctcatggccgtggagtctctcgtgtttgctcccttctttgctacacacggtggcctactcttcaagatattctaa	2301	0.0	MGATILPDLGTEIFIPVCAVVGIAFALFQWFLVSGVKLSAARDTSPNAAGKNGYSDYLIEEEEGINDHNVVLKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSYQTCTYDKTKMCKPALATAVFSTVSFLLGGVTSLISGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGVNHEFTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLIISTALMTIGIAIVSWIALPTSFTIFNFGVQKDVKSWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARSLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKIF	766

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste6g03089	766	Pfam	Inorganic H+ pyrophosphatase	72	751	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Pste6g03089	766	NCBIfam	V-type H(+)-translocating pyrophosphatase	11	761	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Pste6g03089	766	Hamap	Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA].	9	756	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Pste6g03089	766	PANTHER	K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP	6	756	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Pste6g03089	766	PIRSF	H+-PPtase	13	764	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste6g03089	Pste-Chr6	19132662	19136969	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste6g03089	5	629	Primary Pumps ATPases	AT1G15690	87.102	0.0	1110

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste6g03089	6	19132662	19136969	Pste6g03089	6	19132662	19136969	ECH