Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03018 atgaaagtgttcagcatggagaccgagaagaagtgcggttgctgggctgttcttaaacgcggcgttagaggtgcgtgcaaaccttcagcttccagagactctcctaacactatccctcgtactagtctcgtttatgatgcagaaactttttctccatcttcctgtcccagctctataagcatggctaacttcatgattcctttgaaggaacatgggatccaaaccaagctaaatgcaattatcatctattttatttatgaagtagttagaatagaatttgaagaagtgaggcttcacattctttgtattgatgcagcaaccgagacaagatacttgaatgctagcaatagagaactatgtccccccaatgaagctcgattatgttctgataatcctgatctcaaaccccaggagaataaggctccttgccagctccttcaattcacatttcaagaactaaaggccgcaactgggaatttcagaccagatagcattcttggggagggtggctttggttatgttttcaaaggatggattgaggaagatggaacggggcccgcgaaaccagggtcaggcattactgtggctgtcaaaagcttgaagccagatggccttcagggccatagagaatgggtggctgaagttgactttcttggacagcttcaccatcctaatcttgtgaaactaatcggttactgcattgaagatgatcagcggcttcttgtttacgagtttatgacccgtggaagtctggaaaatcatctattcagaagaaccgtgcctcttccgtggtccaacaggattaagattgcccttggtgcagcaaaaggattggccttcctccataatggtcccgaaccagtcatttatagagattttaaaacatctaacattttgcttgatacggagtataatgcgaagctttcagattttgggctagcaaaagcagggcctcaaggagacaaaacacatgtttctaccagagttgttggaacttatggttatgctgctcctgaatatgtcatgacaggacacttgacagctaaaagtgatgtttatagttttggagttgtgttacttgagatattaacaggaagaagatcaatggacaagaagcgcccaagtggtgaacaaaatcttgtttcatgggctaggtcatatttagctgacaagcgaaaattgttccaactcgtggatcctcgccttgaactaaactattctctaaaaggagtgcagaaaatttctcagttagcttataattgcctcagcagagaccccaaatctcggcctaacatggatgaagttgtgaaggctcttactccattgcaggatcttaatgaccttgcaattttgtcttatcactctcgcttgtctcaacaagggagacgaaagaagaaagatggaactcctcatatcacttacacgcaatccaagagcatcagggcttctcccttgaatacgggaaagcagcaccgatga 1479 0.0 MKVFSMETEKKCGCWAVLKRGVRGACKPSASRDSPNTIPRTSLVYDAETFSPSSCPSSISMANFMIPLKEHGIQTKLNAIIIYFIYEVVRIEFEEVRLHILCIDAATETRYLNASNRELCPPNEARLCSDNPDLKPQENKAPCQLLQFTFQELKAATGNFRPDSILGEGGFGYVFKGWIEEDGTGPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTVPLPWSNRIKIALGAAKGLAFLHNGPEPVIYRDFKTSNILLDTEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVSWARSYLADKRKLFQLVDPRLELNYSLKGVQKISQLAYNCLSRDPKSRPNMDEVVKALTPLQDLNDLAILSYHSRLSQQGRRKKKDGTPHITYTQSKSIRASPLNTGKQHR 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03018 492 Gene3D Phosphorylase Kinase; domain 1 135 245 - -
Pste6g03018 492 FunFam Serine/threonine-protein kinase BIK1 129 245 - -
Pste6g03018 492 ProSitePatterns Protein kinases ATP-binding region signature. 166 198 IPR017441 GO:0005524
Pste6g03018 492 Gene3D Transferase(Phosphotransferase) domain 1 246 456 - -
Pste6g03018 492 PANTHER OS01G0588500 PROTEIN-RELATED 142 443 - -
Pste6g03018 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 288 300 IPR008271 GO:0004672|GO:0006468
Pste6g03018 492 SUPERFAMILY Protein kinase-like (PK-like) 142 444 IPR011009 -
Pste6g03018 492 MobiDBLite consensus disorder prediction 472 492 - -
Pste6g03018 492 FunFam Probable serine/threonine-protein kinase PBL8 246 459 - -
Pste6g03018 492 ProSiteProfiles Protein kinase domain profile. 160 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g03018 492 MobiDBLite consensus disorder prediction 457 492 - -
Pste6g03018 492 CDD STKc_IRAK 166 442 - -
Pste6g03018 492 Pfam Protein tyrosine and serine/threonine kinase 164 439 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03018 Pste-Chr6 18188064 18191983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03018 148 439 Glycoside Hydrolase AT3G07070 55.743 3.67e-108 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pste6g03018 PK_Tyr_Ser-Thr 9.3e-49 CL0016